RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 OTOP1Q7RTM1 612 aa11.96□□□□□ -0.49
SHMT2-201ENST00000328923 GTF2IRD2Q86UP8 949 aa11.96□□□□□ -0.49
SHMT2-201ENST00000328923 UNC45BQ8IWX7 931 aa11.96□□□□□ -0.49
SHMT2-201ENST00000328923 SCML4Q8N228 414 aa11.96□□□□□ -0.49
SHMT2-201ENST00000328923 ACCSQ96QU6 501 aa11.96□□□□□ -0.49
SHMT2-201ENST00000328923 ADI1Q9BV57 179 aa11.96□□□□□ -0.49
SHMT2-201ENST00000328923 AMNQ9BXJ7 453 aa11.96□□□□□ -0.49
SHMT2-201ENST00000328923 TDRD3Q9H7E2 651 aaKnown RBP11.96□□□□□ -0.49
SHMT2-201ENST00000328923 PNPOQ9NVS9 261 aa11.96□□□□□ -0.49
SHMT2-201ENST00000328923 IL37Q9NZH6 218 aa11.96□□□□□ -0.49
SHMT2-201ENST00000328923 FARP1Q9Y4F1 1045 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-201ENST00000328923 PCDHGB3Q9Y5G1 929 aa11.96□□□□□ -0.49
SHMT2-201ENST00000328923 IGLV3-22A0A075B6J6 115 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 SAC3D1A6NKF1 404 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 FAM25AB3EWG3 89 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 FAM25CB3EWG5 89 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 FAM25GB3EWG6 89 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 E7ESA3 106 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 PLK4O00444 970 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 B4GAT1O43505 415 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 NDST3O95803 873 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 TP53P04637 393 aaPredicted RBP11.96□□□□□ -0.5
SHMT2-201ENST00000328923 ITGAVP06756 1048 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 ENO3P13929 434 aaPredicted RBP11.96□□□□□ -0.5
SHMT2-201ENST00000328923 ME2P23368 584 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 SLC10A2Q12908 348 aaPredicted RBP11.96□□□□□ -0.5
SHMT2-201ENST00000328923 TRIM25Q14258 630 aaKnown RBP11.96□□□□□ -0.5
SHMT2-201ENST00000328923 AGAP6Q5VW22 663 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 CRTC3Q6UUV7 619 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 C16orf89Q6UX73 402 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 RHPN2Q8IUC4 686 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 SLAIN1Q8ND83 568 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 SLC22A8Q8TCC7 542 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 CYGBQ8WWM9 190 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 GTF2H4Q92759 462 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 SNAPC3Q92966 411 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 NKD2Q969F2 451 aaPredicted RBP11.96□□□□□ -0.5
SHMT2-201ENST00000328923 NT5C1BQ96P26 610 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 AGAP4Q96P64 663 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 RNPEPQ9H4A4 650 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 ERVMER34-1Q9H9K5 563 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 MCCC2Q9HCC0 563 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 TCF7L2Q9NQB0 619 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 PCDH10Q9P2E7 1040 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 PMF1-BGLAPU3KQ54 211 aa11.96□□□□□ -0.5
SHMT2-201ENST00000328923 TRIM49D1C9J1S8 452 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 K7ENM7 598 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 AXIN1O15169 862 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 PI15O43692 258 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 SYNCRIPO60506 623 aaKnown RBP11.95□□□□□ -0.5
SHMT2-201ENST00000328923 PSMD10O75832 226 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 TOP3BO95985 862 aaKnown RBP11.95□□□□□ -0.5
SHMT2-201ENST00000328923 SERPINH1P50454 418 aaKnown RBP11.95□□□□□ -0.5
SHMT2-201ENST00000328923 GPR85P60893 370 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 TAP1Q03518 808 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 RAD51Q06609 339 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 NFX1Q12986 1120 aaKnown RBP11.95□□□□□ -0.5
SHMT2-201ENST00000328923 C5orf22Q49AR2 442 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 KRT39Q6A163 491 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 TATDN1Q6P1N9 297 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 PALM2Q8IXS6 379 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 RCOR2Q8IZ40 523 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 CLYBLQ8N0X4 340 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 TAB3Q8N5C8 712 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-201ENST00000328923 KYQ8NBH2 561 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 CDC26Q8NHZ8 85 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 CHAC2Q8WUX2 184 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 KCTD4Q8WVF5 259 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 PRMT6Q96LA8 375 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-201ENST00000328923 TSNARE1Q96NA8 513 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 NTN4Q9HB63 628 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 MRPL47Q9HD33 250 aaKnown RBP11.95□□□□□ -0.5
SHMT2-201ENST00000328923 HSPBP1Q9NZL4 362 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 IP6K2Q9UHH9 426 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 SFMBT1Q9UHJ3 866 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 DNPEPQ9ULA0 475 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 AP4E1Q9UPM8 1137 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 BCS1LQ9Y276 419 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 FER1L6Q2WGJ9 1857 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 XYLBO75191 536 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 SLITRK5O94991 958 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 BPGMP07738 259 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 INHBAP08476 426 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 BTF3P20290 206 aaKnown RBP11.95□□□□□ -0.5
SHMT2-201ENST00000328923 MMP8P22894 467 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 ETV1P50549 477 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 PRELPP51888 382 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 PLA2G16P53816 162 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 NME5P56597 212 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 FPGSQ05932 587 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 C1QBPQ07021 282 aaKnown RBP11.95□□□□□ -0.5
SHMT2-201ENST00000328923 BST2Q10589 180 aaKnown RBP11.95□□□□□ -0.5
SHMT2-201ENST00000328923 ILF2Q12905 390 aaKnown RBP11.95□□□□□ -0.5
SHMT2-201ENST00000328923 ESCO2Q56NI9 601 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 ANKRD22Q5VYY1 191 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 GADL1Q6ZQY3 521 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 ARCQ7LC44 396 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 AFG1LQ8WV93 481 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 SLCO4A1Q96BD0 722 aa11.95□□□□□ -0.5
SHMT2-201ENST00000328923 ST6GALNAC4Q9H4F1 302 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms