RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 IRF2BP1Q8IU81 584 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 OR52K2Q8NGK3 314 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 C1orf50Q9BV19 199 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 FGFBP2Q9BYJ0 223 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 VAV3Q9UKW4 847 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 ERBB2P04626 1255 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 RPL38P63173 70 aaKnown RBP14.05□□□□□ -0.16
PRKCB-201ENST00000303531 MRPS6P82932 125 aaKnown RBP14.05□□□□□ -0.16
PRKCB-201ENST00000303531 CCDC157Q569K6 752 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 PRAMEF19Q5SWL8 479 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 PACS1Q6VY07 963 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 DENND1CQ8IV53 801 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 MAGEC3Q8TD91 643 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 LPPQ93052 612 aa14.05□□□□□ -0.16
PRKCB-201ENST00000303531 EDF1O60869 148 aaKnown RBP14.04□□□□□ -0.16
PRKCB-201ENST00000303531 MRPS5P82675 430 aaKnown RBP14.04□□□□□ -0.16
PRKCB-201ENST00000303531 DCTN2Q13561 401 aaKnown RBP14.04□□□□□ -0.16
PRKCB-201ENST00000303531 DGKZQ13574 1117 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 ZNF618Q5T7W0 954 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 EEF1DP3Q658K8 133 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 TTC27Q6P3X3 843 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 ZNF549Q6P9A3 640 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 TNFRSF25Q93038 417 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 TM6SF2Q9BZW4 377 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 ULK1O75385 1050 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 RTP1P59025 263 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 TOP3AQ13472 1001 aaPredicted RBP14.04□□□□□ -0.16
PRKCB-201ENST00000303531 QPCTQ16769 361 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 KREMEN1Q96MU8 473 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 TMEM39AQ9NV64 488 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 ATAD3AQ9NVI7 634 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 ATRNO75882 1429 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 ATXN2Q99700 1313 aaKnown RBP14.04□□□□□ -0.16
PRKCB-201ENST00000303531 AMHP03971 560 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 PFKPQ01813 784 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 INTS11Q5TA45 600 aaKnown RBP14.04□□□□□ -0.16
PRKCB-201ENST00000303531 TTC23Q5W5X9 447 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 LLGL2Q6P1M3 1020 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 SPESP1Q6UW49 350 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 RASGEF1CQ8N431 466 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 PPP3R2Q96LZ3 170 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 OSBPL6Q9BZF3 934 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 SLC12A4Q9UP95 1085 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 ATP6AP2A0A1C7CYW4 349 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 DDX3YO15523 660 aaKnown RBP14.04□□□□□ -0.16
PRKCB-201ENST00000303531 ATP6AP2O75787 350 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 KLHL17Q6TDP4 642 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 IRF6O14896 467 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 MFN2O95140 757 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 UMPSP11172 480 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 FUT2Q10981 343 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 ITGADQ13349 1161 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 PABPC1LQ4VXU2 614 aaKnown RBP14.04□□□□□ -0.16
PRKCB-201ENST00000303531 GPRIN3Q6ZVF9 776 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 NUAK2Q9H093 628 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 PNPOQ9NVS9 261 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 XYLBO75191 536 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 ABRAXAS1Q6UWZ7 409 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 CMC1Q7Z7K0 106 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 LRRC4CQ9HCJ2 640 aa14.04□□□□□ -0.16
PRKCB-201ENST00000303531 TMEM191CA6NGB0 347 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 SNRPD1P62314 119 aaKnown RBP14.03□□□□□ -0.16
PRKCB-201ENST00000303531 MRPL45Q9BRJ2 306 aaKnown RBP14.03□□□□□ -0.16
PRKCB-201ENST00000303531 CDH19Q9H159 772 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 CAB39LQ9H9S4 337 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.03□□□□□ -0.16
PRKCB-201ENST00000303531 RPS6KA6Q9UK32 745 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 LINC00032P0C843 101 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 NTSP30990 170 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 GALNT3Q14435 633 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 BROXQ5VW32 411 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 ARHGAP36Q6ZRI8 547 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 LRRC49Q8IUZ0 686 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 PRKAG1P54619 331 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 USP4Q13107 963 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 TMEM139Q8IV31 216 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 AADATQ8N5Z0 425 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 QRFPRQ96P65 431 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 RRAGCQ9HB90 399 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 PCDH18Q9HCL0 1135 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 FBXO10Q9UK96 956 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 FBXO5Q9UKT4 447 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 TTKP33981 857 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 CDC42P60953 191 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 PCBP1Q15365 356 aaKnown RBP eCLIP14.03□□□□□ -0.162e-7■■■■■ 34.6
PRKCB-201ENST00000303531 TIMM50Q3ZCQ8 353 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 KBTBD2Q8IY47 623 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 MRPL39Q9NYK5 338 aaKnown RBP14.03□□□□□ -0.16
PRKCB-201ENST00000303531 SPIDRQ14159 915 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 OFCC1Q8IZS5 231 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 NUDT14O95848 222 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 ZNF37AP17032 561 aaPredicted RBP14.03□□□□□ -0.16
PRKCB-201ENST00000303531 EIF3MQ7L2H7 374 aaKnown RBP14.03□□□□□ -0.16
PRKCB-201ENST00000303531 ZC3H7AQ8IWR0 971 aaKnown RBP14.03□□□□□ -0.16
PRKCB-201ENST00000303531 ST13P5Q8NFI4 369 aaPredicted RBP14.03□□□□□ -0.16
PRKCB-201ENST00000303531 OR7A2PQ8NGA2 310 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 P2RY11Q96G91 374 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 REXO5Q96IC2 774 aaKnown RBP14.03□□□□□ -0.16
PRKCB-201ENST00000303531 EXOC2Q96KP1 924 aa14.03□□□□□ -0.16
PRKCB-201ENST00000303531 OLFM1Q99784 485 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms