RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 UNC93B1Q9H1C4 597 aa22.16■■□□□ 1.14
TPM4-201ENST00000300933 VCX3BQ9H321 246 aa22.16■■□□□ 1.14
TPM4-201ENST00000300933 VCX3AQ9NNX9 186 aa22.16■■□□□ 1.14
TPM4-201ENST00000300933 KCNK4Q9NYG8 393 aa22.16■■□□□ 1.14
TPM4-201ENST00000300933 MYLKQ15746 1914 aa22.16■■□□□ 1.14
TPM4-201ENST00000300933 PAX3P23760 479 aa22.15■■□□□ 1.14
TPM4-201ENST00000300933 CDK7P50613 346 aa22.15■■□□□ 1.14
TPM4-201ENST00000300933 ZNF789Q5FWF6 425 aa22.15■■□□□ 1.14
TPM4-201ENST00000300933 AFMIDQ63HM1 303 aa22.15■■□□□ 1.14
TPM4-201ENST00000300933 NET1Q7Z628 596 aaPredicted RBP22.15■■□□□ 1.14
TPM4-201ENST00000300933 LDB1Q86U70 411 aaPredicted RBP22.15■■□□□ 1.14
TPM4-201ENST00000300933 COL4A4P53420 1690 aaPredicted RBP22.15■■□□□ 1.14
TPM4-201ENST00000300933 ADRA1AP35348 466 aa22.15■■□□□ 1.14
TPM4-201ENST00000300933 MAVSQ7Z434 540 aa22.15■■□□□ 1.14
TPM4-201ENST00000300933 CEP97Q8IW35 865 aa22.15■■□□□ 1.14
TPM4-201ENST00000300933 TTC16Q8NEE8 873 aa22.15■■□□□ 1.14
TPM4-201ENST00000300933 KCTD4Q8WVF5 259 aa22.15■■□□□ 1.14
TPM4-201ENST00000300933 PYDC1Q8WXC3 89 aa22.15■■□□□ 1.14
TPM4-201ENST00000300933 TASP1Q9H6P5 420 aa22.15■■□□□ 1.14
TPM4-201ENST00000300933 SP110Q9HB58 689 aa22.15■■□□□ 1.14
TPM4-201ENST00000300933 PRDM5Q9NQX1 630 aaPredicted RBP22.15■■□□□ 1.14
TPM4-201ENST00000300933 F8W8V4 182 aa22.14■■□□□ 1.14
TPM4-201ENST00000300933 TLR5O60602 858 aa22.14■■□□□ 1.14
TPM4-201ENST00000300933 TM7SF2O76062 418 aa22.14■■□□□ 1.14
TPM4-201ENST00000300933 FGFR3P22607 806 aa22.14■■□□□ 1.14
TPM4-201ENST00000300933 ACTR3P61158 418 aa22.14■■□□□ 1.14
TPM4-201ENST00000300933 RANBP10Q6VN20 620 aa22.14■■□□□ 1.14
TPM4-201ENST00000300933 MYLK4Q86YV6 388 aaPredicted RBP22.14■■□□□ 1.14
TPM4-201ENST00000300933 ARHGAP18Q8N392 663 aa22.14■■□□□ 1.14
TPM4-201ENST00000300933 PIWIL2Q8TC59 973 aaKnown RBP22.14■■□□□ 1.14
TPM4-201ENST00000300933 C1orf74Q96LT6 269 aa22.14■■□□□ 1.14
TPM4-201ENST00000300933 MAN1C1Q9NR34 630 aa22.14■■□□□ 1.14
TPM4-201ENST00000300933 CAPN14A8MX76 684 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 PRR5-ARHGAP8B1AHC4 643 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 SPECC1L-ADORA2AF8WAN1 911 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 ATF6P18850 670 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 GEMP55040 296 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 ARHGAP8P85298 464 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 MARC1Q5VT66 337 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 ZNF470Q6ECI4 717 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 MSANTD2Q6P1R3 559 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 TLR8Q9NR97 1041 aaKnown RBP22.14■■□□□ 1.13
TPM4-201ENST00000300933 KCTD3Q9Y597 815 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 G3V2L1 256 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 IL1BP01584 269 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 SERPINE1P05121 402 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 CRABP2P29373 138 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 OR1E1P30953 314 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 SLC1A2P43004 574 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 ARCN1P48444 511 aaKnown RBP22.14■■□□□ 1.13
TPM4-201ENST00000300933 PTPRCAPQ14761 206 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 TRMT5Q32P41 509 aaKnown RBP22.14■■□□□ 1.13
TPM4-201ENST00000300933 EML3Q32P44 896 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 PDPK2PQ6A1A2 396 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 NADSYN1Q6IA69 706 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 FAM117BQ6P1L5 589 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 PPHLN1Q8NEY8 458 aaKnown RBP22.14■■□□□ 1.13
TPM4-201ENST00000300933 OMDQ99983 421 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 NMRAL1Q9HBL8 299 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 LMCD1Q9NZU5 365 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 PLA2G4CQ9UP65 541 aa22.14■■□□□ 1.13
TPM4-201ENST00000300933 PIRTP0C851 137 aa22.13■■□□□ 1.13
TPM4-201ENST00000300933 GPR17Q13304 367 aa22.13■■□□□ 1.13
TPM4-201ENST00000300933 LPCAT4Q643R3 524 aa22.13■■□□□ 1.13
TPM4-201ENST00000300933 TIGD7Q6NT04 549 aaPredicted RBP22.13■■□□□ 1.13
TPM4-201ENST00000300933 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.13■■□□□ 1.136e-8■□□□□ 9.1
TPM4-201ENST00000300933 PGBD5Q8N414 524 aa22.13■■□□□ 1.13
TPM4-201ENST00000300933 SGF29Q96ES7 293 aa22.13■■□□□ 1.13
TPM4-201ENST00000300933 SCYL1Q96KG9 808 aa22.13■■□□□ 1.13
TPM4-201ENST00000300933 BTN2A3PQ96KV6 586 aa22.13■■□□□ 1.13
TPM4-201ENST00000300933 DEFB118Q96PH6 123 aa22.13■■□□□ 1.13
TPM4-201ENST00000300933 MCMBPQ9BTE3 642 aa22.13■■□□□ 1.13
TPM4-201ENST00000300933 TCAF1Q9Y4C2 921 aa22.13■■□□□ 1.13
TPM4-201ENST00000300933 DOCK4Q8N1I0 1966 aa22.13■■□□□ 1.13
TPM4-201ENST00000300933 A0A0D9SEW6 157 aa22.13■■□□□ 1.13
TPM4-201ENST00000300933 RHOQP17081 205 aa22.13■■□□□ 1.13
TPM4-201ENST00000300933 OR1D2P34982 312 aa22.13■■□□□ 1.13
TPM4-201ENST00000300933 MAGEA12P43365 314 aa22.13■■□□□ 1.13
TPM4-201ENST00000300933 ZNF33AQ06730 810 aa22.13■■□□□ 1.13
TPM4-201ENST00000300933 ISLR2Q6UXK2 745 aa22.13■■□□□ 1.13
TPM4-201ENST00000300933 ST13P4Q8IZP2 240 aaPredicted RBP22.13■■□□□ 1.13
TPM4-201ENST00000300933 UMODL1-AS1Q8N2C9 162 aa22.13■■□□□ 1.13
TPM4-201ENST00000300933 ATP6V0D2Q8N8Y2 350 aa22.13■■□□□ 1.13
TPM4-201ENST00000300933 PPP2R3CQ969Q6 453 aa22.13■■□□□ 1.13
TPM4-201ENST00000300933 TLK1Q9UKI8 766 aa22.13■■□□□ 1.13
TPM4-201ENST00000300933 RUVBL2Q9Y230 463 aaKnown RBP22.13■■□□□ 1.13
TPM4-201ENST00000300933 TRIM17Q9Y577 477 aa22.13■■□□□ 1.13
TPM4-201ENST00000300933 OR51F1A6NGY5 319 aa22.12■■□□□ 1.13
TPM4-201ENST00000300933 TIMM44O43615 452 aa22.12■■□□□ 1.13
TPM4-201ENST00000300933 GJB5O95377 273 aa22.12■■□□□ 1.13
TPM4-201ENST00000300933 SLC2A3P11169 496 aa22.12■■□□□ 1.13
TPM4-201ENST00000300933 POLD3Q15054 466 aaPredicted RBP22.12■■□□□ 1.13
TPM4-201ENST00000300933 ZNF781Q8N8C0 355 aa22.12■■□□□ 1.13
TPM4-201ENST00000300933 WWP1Q9H0M0 922 aa22.12■■□□□ 1.13
TPM4-201ENST00000300933 TAGLN3Q9UI15 199 aa22.12■■□□□ 1.13
TPM4-201ENST00000300933 MTF2Q9Y483 593 aaPredicted RBP22.12■■□□□ 1.13
TPM4-201ENST00000300933 OR6C75A6NL08 312 aa22.12■■□□□ 1.13
TPM4-201ENST00000300933 CHRNGP07510 517 aa22.12■■□□□ 1.13
TPM4-201ENST00000300933 MAGEA11P43364 429 aa22.12■■□□□ 1.13
TPM4-201ENST00000300933 ABCE1P61221 599 aaKnown RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms