RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 VTI1BQ9UEU0 232 aa15.22■□□□□ 0.03
CCDC116-201ENST00000292779 IPO11Q9UI26 975 aaKnown RBP15.22■□□□□ 0.03
CCDC116-201ENST00000292779 ADAMTS6Q9UKP5 1117 aa15.22■□□□□ 0.03
CCDC116-201ENST00000292779 FBXO5Q9UKT4 447 aa15.22■□□□□ 0.03
CCDC116-201ENST00000292779 KIAA0100Q14667 2235 aaKnown RBP15.22■□□□□ 0.03
CCDC116-201ENST00000292779 RGSL1A5PLK6 1076 aa15.22■□□□□ 0.03
CCDC116-201ENST00000292779 WNT3AP56704 352 aa15.22■□□□□ 0.03
CCDC116-201ENST00000292779 LRRC36Q1X8D7 754 aa15.22■□□□□ 0.03
CCDC116-201ENST00000292779 SLC39A12Q504Y0 691 aa15.22■□□□□ 0.03
CCDC116-201ENST00000292779 TMEM198Q66K66 360 aa15.22■□□□□ 0.03
CCDC116-201ENST00000292779 KIAA0930Q6ICG6 404 aaPredicted RBP15.22■□□□□ 0.03
CCDC116-201ENST00000292779 ZNF280DQ6N043 979 aa15.22■□□□□ 0.03
CCDC116-201ENST00000292779 ZNF598Q86UK7 904 aaKnown RBP15.22■□□□□ 0.03
CCDC116-201ENST00000292779 ZNF280BQ86YH2 543 aa15.22■□□□□ 0.03
CCDC116-201ENST00000292779 SPNS2Q8IVW8 549 aa15.22■□□□□ 0.03
CCDC116-201ENST00000292779 SGF29Q96ES7 293 aa15.22■□□□□ 0.03
CCDC116-201ENST00000292779 CATSPER2Q96P56 530 aa15.22■□□□□ 0.03
CCDC116-201ENST00000292779 BEGAINQ9BUH8 593 aa15.22■□□□□ 0.03
CCDC116-201ENST00000292779 YIPF3Q9GZM5 350 aa15.22■□□□□ 0.03
CCDC116-201ENST00000292779 NOL6Q9H6R4 1146 aaKnown RBP15.22■□□□□ 0.03
CCDC116-201ENST00000292779 PCDH10Q9P2E7 1040 aa15.22■□□□□ 0.03
CCDC116-201ENST00000292779 PACSIN3Q9UKS6 424 aa15.22■□□□□ 0.03
CCDC116-201ENST00000292779 CDYLQ9Y232 598 aa15.22■□□□□ 0.03
CCDC116-201ENST00000292779 NOD1Q9Y239 953 aa15.22■□□□□ 0.03
CCDC116-201ENST00000292779 MAGEA13PA6NCF6 341 aa15.21■□□□□ 0.03
CCDC116-201ENST00000292779 TYMPP19971 482 aa15.21■□□□□ 0.03
CCDC116-201ENST00000292779 MLLT6P55198 1093 aaPredicted RBP15.21■□□□□ 0.03
CCDC116-201ENST00000292779 NSUN2Q08J23 767 aaKnown RBP eCLIP15.21■□□□□ 0.03
CCDC116-201ENST00000292779 PDCD2Q16342 344 aaPredicted RBP15.21■□□□□ 0.03
CCDC116-201ENST00000292779 GSTA3Q16772 222 aa15.21■□□□□ 0.03
CCDC116-201ENST00000292779 PIK3R6Q5UE93 754 aa15.21■□□□□ 0.03
CCDC116-201ENST00000292779 SDHAF4Q5VUM1 108 aa15.21■□□□□ 0.03
CCDC116-201ENST00000292779 LPCAT4Q643R3 524 aa15.21■□□□□ 0.03
CCDC116-201ENST00000292779 NXNQ6DKJ4 435 aa15.21■□□□□ 0.03
CCDC116-201ENST00000292779 OR52E8Q6IFG1 317 aa15.21■□□□□ 0.03
CCDC116-201ENST00000292779 NEPROQ6NW34 567 aa15.21■□□□□ 0.03
CCDC116-201ENST00000292779 CNSTQ6PJW8 725 aa15.21■□□□□ 0.03
CCDC116-201ENST00000292779 RNF180Q86T96 592 aa15.21■□□□□ 0.03
CCDC116-201ENST00000292779 CPSF7Q8N684 471 aaKnown RBP15.21■□□□□ 0.03
CCDC116-201ENST00000292779 TXNDC5Q8NBS9 432 aaKnown RBP15.21■□□□□ 0.03
CCDC116-201ENST00000292779 HEXDCQ8WVB3 486 aa15.21■□□□□ 0.03
CCDC116-201ENST00000292779 MARK4Q96L34 752 aa15.21■□□□□ 0.03
CCDC116-201ENST00000292779 PPP1R12CQ9BZL4 782 aa15.21■□□□□ 0.03
CCDC116-201ENST00000292779 MRPL46Q9H2W6 279 aaKnown RBP15.21■□□□□ 0.03
CCDC116-201ENST00000292779 ZNF385DQ9H6B1 395 aa15.21■□□□□ 0.03
CCDC116-201ENST00000292779 TBC1D13Q9NVG8 400 aa15.21■□□□□ 0.03
CCDC116-201ENST00000292779 ABI2Q9NYB9 513 aaPredicted RBP15.21■□□□□ 0.03
CCDC116-201ENST00000292779 A0A1W2PQ45 241 aaPredicted RBP15.2■□□□□ 0.02
CCDC116-201ENST00000292779 A0A1W2PQY0 241 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 TMEM233B4DJY2 109 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 SLCO1B7G3V0H7 640 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 UBTFL6P0CB48 400 aaPredicted RBP15.2■□□□□ 0.02
CCDC116-201ENST00000292779 PPARGP37231 505 aaPredicted RBP15.2■□□□□ 0.02
CCDC116-201ENST00000292779 ARHGEF6Q15052 776 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 RBM20Q5T481 1227 aaKnown RBP15.2■□□□□ 0.02
CCDC116-201ENST00000292779 KDELC1Q6UW63 502 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 TFAP2DQ7Z6R9 452 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 RP9Q8TA86 221 aaKnown RBP15.2■□□□□ 0.02
CCDC116-201ENST00000292779 SERPINB11Q96P15 392 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 NDNQ99608 321 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 MRPL57Q9BQC6 102 aaKnown RBP15.2■□□□□ 0.02
CCDC116-201ENST00000292779 A0A087X1B8 175 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 PEX11BO96011 259 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 CPB1P15086 417 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 RAG1P15918 1043 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 SLC12A2P55011 1212 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 POU4F1Q01851 419 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 CYLC2Q14093 348 aaPredicted RBP15.2■□□□□ 0.02
CCDC116-201ENST00000292779 ZNF789Q5FWF6 425 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 DSELQ8IZU8 1212 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 KDM1BQ8NB78 822 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 KYQ8NBH2 561 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 PCSK9Q8NBP7 692 aaKnown RBP15.2■□□□□ 0.02
CCDC116-201ENST00000292779 PDCD6IPQ8WUM4 868 aaKnown RBP15.2■□□□□ 0.02
CCDC116-201ENST00000292779 DEFB118Q96PH6 123 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 NR1H4Q96RI1 486 aaPredicted RBP15.2■□□□□ 0.02
CCDC116-201ENST00000292779 CCDC28BQ9BUN5 200 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 PRKD2Q9BZL6 878 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 SLC25A51Q9H1U9 297 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 EBF3Q9H4W6 596 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 POMKQ9H5K3 350 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 PCDHB8Q9UN66 801 aa15.2■□□□□ 0.02
CCDC116-201ENST00000292779 NEMP2A6NFY4 417 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 H3BNX3 289 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 MAP3K13O43283 966 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 PAX3P23760 479 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 GPR15P49685 360 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 MAXP61244 160 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 NRG1Q02297 640 aaPredicted RBP15.19■□□□□ 0.02
CCDC116-201ENST00000292779 CSHL1Q14406 222 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 DDR2Q16832 855 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 TRIM71Q2Q1W2 868 aaKnown RBP15.19■□□□□ 0.02
CCDC116-201ENST00000292779 C16orf89Q6UX73 402 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 KBTBD6Q86V97 674 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 PDSS2Q86YH6 399 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 LRRC49Q8IUZ0 686 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 PNPLA1Q8N8W4 532 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 GDPD5Q8WTR4 605 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 RCN3Q96D15 328 aa15.19■□□□□ 0.02
CCDC116-201ENST00000292779 NT5MQ9NPB1 228 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms