RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 USP46P62068 366 aa19.53■□□□□ 0.72
SCARB1-201ENST00000261693 ZNF789Q5FWF6 425 aa19.53■□□□□ 0.72
SCARB1-201ENST00000261693 DENND5AQ6IQ26 1287 aa19.53■□□□□ 0.72
SCARB1-201ENST00000261693 SMG8Q8ND04 991 aaKnown RBP19.53■□□□□ 0.72
SCARB1-201ENST00000261693 LPGAT1Q92604 370 aa19.53■□□□□ 0.72
SCARB1-201ENST00000261693 PHF21BQ96EK2 531 aa19.53■□□□□ 0.72
SCARB1-201ENST00000261693 ZNF512Q96ME7 567 aaPredicted RBP19.53■□□□□ 0.72
SCARB1-201ENST00000261693 MRPL57Q9BQC6 102 aaKnown RBP19.53■□□□□ 0.72
SCARB1-201ENST00000261693 CACNA2D2Q9NY47 1150 aa19.53■□□□□ 0.72
SCARB1-201ENST00000261693 PLK2Q9NYY3 685 aa19.53■□□□□ 0.72
SCARB1-201ENST00000261693 RNF11Q9Y3C5 154 aa19.53■□□□□ 0.72
SCARB1-201ENST00000261693 PRORSD1PA6NEY8 169 aa19.53■□□□□ 0.72
SCARB1-201ENST00000261693 PTGESO14684 152 aa19.53■□□□□ 0.72
SCARB1-201ENST00000261693 NPHS1O60500 1241 aa19.53■□□□□ 0.72
SCARB1-201ENST00000261693 TSPAN8P19075 237 aa19.53■□□□□ 0.72
SCARB1-201ENST00000261693 FASTKQ14296 549 aaKnown RBP19.53■□□□□ 0.72
SCARB1-201ENST00000261693 DUSP28Q4G0W2 176 aa19.53■□□□□ 0.72
SCARB1-201ENST00000261693 NOMO2Q5JPE7 1267 aa19.53■□□□□ 0.72
SCARB1-201ENST00000261693 REP15Q6BDI9 236 aa19.53■□□□□ 0.72
SCARB1-201ENST00000261693 PIWIL4Q7Z3Z4 852 aaKnown RBP19.53■□□□□ 0.72
SCARB1-201ENST00000261693 MYO1HQ8N1T3 1032 aa19.53■□□□□ 0.72
SCARB1-201ENST00000261693 PPHLN1Q8NEY8 458 aaKnown RBP19.53■□□□□ 0.72
SCARB1-201ENST00000261693 SENP8Q96LD8 212 aa19.53■□□□□ 0.72
SCARB1-201ENST00000261693 SLC39A3Q9BRY0 314 aa19.53■□□□□ 0.72
SCARB1-201ENST00000261693 SLC2A11Q9BYW1 496 aa19.53■□□□□ 0.72
SCARB1-201ENST00000261693 CNGB3Q9NQW8 809 aa19.53■□□□□ 0.72
SCARB1-201ENST00000261693 GMPR2Q9P2T1 348 aaKnown RBP19.53■□□□□ 0.72
SCARB1-201ENST00000261693 AAR2Q9Y312 384 aaKnown RBP19.53■□□□□ 0.72
SCARB1-201ENST00000261693 RRN3P2A6NIE6 340 aa19.52■□□□□ 0.72
SCARB1-201ENST00000261693 PSMD12O00232 456 aaPredicted RBP19.52■□□□□ 0.72
SCARB1-201ENST00000261693 GABRDO14764 452 aa19.52■□□□□ 0.72
SCARB1-201ENST00000261693 HSPA1AP0DMV8 641 aaKnown RBP19.52■□□□□ 0.72
SCARB1-201ENST00000261693 HSPA1BP0DMV9 641 aaKnown RBP19.52■□□□□ 0.72
SCARB1-201ENST00000261693 XKR4Q5GH76 650 aa19.52■□□□□ 0.72
SCARB1-201ENST00000261693 MTX3Q5HYI7 312 aa19.52■□□□□ 0.72
SCARB1-201ENST00000261693 TAC4Q86UU9 113 aa19.52■□□□□ 0.72
SCARB1-201ENST00000261693 CNTN4Q8IWV2 1026 aa19.52■□□□□ 0.72
SCARB1-201ENST00000261693 SHCBP1Q8NEM2 672 aa19.52■□□□□ 0.72
SCARB1-201ENST00000261693 OR9I1Q8NGQ6 314 aa19.52■□□□□ 0.72
SCARB1-201ENST00000261693 PHF12Q96QT6 1004 aa19.52■□□□□ 0.72
SCARB1-201ENST00000261693 SLC29A1Q99808 456 aa19.52■□□□□ 0.72
SCARB1-201ENST00000261693 CIB1Q99828 191 aa19.52■□□□□ 0.72
SCARB1-201ENST00000261693 PHF24Q9UPV7 400 aa19.52■□□□□ 0.72
SCARB1-201ENST00000261693 ATP6AP2A0A1C7CYW4 349 aa19.52■□□□□ 0.71
SCARB1-201ENST00000261693 UBDO15205 165 aa19.52■□□□□ 0.71
SCARB1-201ENST00000261693 ATP6AP2O75787 350 aa19.52■□□□□ 0.71
SCARB1-201ENST00000261693 CAPNS1P04632 268 aa19.52■□□□□ 0.71
SCARB1-201ENST00000261693 ATP5F1P24539 256 aaPredicted RBP19.52■□□□□ 0.71
SCARB1-201ENST00000261693 SLC5A2P31639 672 aa19.52■□□□□ 0.71
SCARB1-201ENST00000261693 CXCR3P49682 368 aa19.52■□□□□ 0.71
SCARB1-201ENST00000261693 AFF1P51825 1210 aaKnown RBP19.52■□□□□ 0.71
SCARB1-201ENST00000261693 LRP8Q14114 963 aa19.52■□□□□ 0.71
SCARB1-201ENST00000261693 PITRM1Q5JRX3 1037 aa19.52■□□□□ 0.71
SCARB1-201ENST00000261693 IL31Q6EBC2 164 aa19.52■□□□□ 0.71
SCARB1-201ENST00000261693 DPP9Q86TI2 863 aa19.52■□□□□ 0.71
SCARB1-201ENST00000261693 LCA5Q86VQ0 697 aa19.52■□□□□ 0.71
SCARB1-201ENST00000261693 HERC6Q8IVU3 1022 aa19.52■□□□□ 0.71
SCARB1-201ENST00000261693 NOL11Q9H8H0 719 aaKnown RBP19.52■□□□□ 0.71
SCARB1-201ENST00000261693 PREBQ9HCU5 417 aa19.52■□□□□ 0.71
SCARB1-201ENST00000261693 IGSF5Q9NSI5 407 aa19.52■□□□□ 0.71
SCARB1-201ENST00000261693 PLXNB2O15031 1838 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 ARHGEF37A1IGU5 675 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 DYNC1LI2O43237 492 aaPredicted RBP19.51■□□□□ 0.71
SCARB1-201ENST00000261693 ZNF189O75820 626 aaPredicted RBP19.51■□□□□ 0.71
SCARB1-201ENST00000261693 TMCC1O94876 653 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 CD151P48509 253 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 NR1H2P55055 460 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 PCSK7Q16549 785 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 TWF2Q6IBS0 349 aaKnown RBP19.51■□□□□ 0.71
SCARB1-201ENST00000261693 BHLHA9Q7RTU4 235 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 CHERPQ8IWX8 916 aaKnown RBP19.51■□□□□ 0.71
SCARB1-201ENST00000261693 ATPAF2Q8N5M1 289 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 SLCO4A1Q96BD0 722 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 TMIGD2Q96BF3 282 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 CDCA5Q96FF9 252 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 UNC93B1Q9H1C4 597 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 SUCOQ9UBS9 1254 aaKnown RBP19.51■□□□□ 0.71
SCARB1-201ENST00000261693 TCAF1Q9Y4C2 921 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 AP3B1O00203 1094 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 CPB1P15086 417 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 YWHAQP27348 245 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 GJA5P36382 358 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 STX5Q13190 355 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 IKBKEQ14164 716 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 CUZD1Q86UP6 607 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 TSPAN14Q8NG11 270 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 FAM110BQ8TC76 370 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 PPWD1Q96BP3 646 aaKnown RBP19.51■□□□□ 0.71
SCARB1-201ENST00000261693 PGAP3Q96FM1 320 aaPredicted RBP19.51■□□□□ 0.71
SCARB1-201ENST00000261693 OLFM1Q99784 485 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 FSD1LQ9BXM9 530 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 CAAP1Q9H8G2 361 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 GLOD4Q9HC38 313 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 UTP6Q9NYH9 597 aaKnown RBP19.51■□□□□ 0.71
SCARB1-201ENST00000261693 FBXO5Q9UKT4 447 aa19.51■□□□□ 0.71
SCARB1-201ENST00000261693 HEATR9A2RTY3 570 aa19.5■□□□□ 0.71
SCARB1-201ENST00000261693 TREHO43280 583 aa19.5■□□□□ 0.71
SCARB1-201ENST00000261693 F9P00740 461 aa19.5■□□□□ 0.71
SCARB1-201ENST00000261693 RHDQ02161 417 aa19.5■□□□□ 0.71
SCARB1-201ENST00000261693 TMEM259Q4ZIN3 620 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms