RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 MMP2P08253 660 aa19.72■□□□□ 0.75
CDC42EP1-201ENST00000249014 CPB1P15086 417 aa19.72■□□□□ 0.75
CDC42EP1-201ENST00000249014 PAX7P23759 505 aa19.72■□□□□ 0.75
CDC42EP1-201ENST00000249014 CD86P42081 329 aa19.72■□□□□ 0.75
CDC42EP1-201ENST00000249014 OR1G1P47890 313 aa19.72■□□□□ 0.75
CDC42EP1-201ENST00000249014 HK2P52789 917 aa19.72■□□□□ 0.75
CDC42EP1-201ENST00000249014 MSLNQ13421 630 aaPredicted RBP19.72■□□□□ 0.75
CDC42EP1-201ENST00000249014 PSMD5Q16401 504 aa19.72■□□□□ 0.75
CDC42EP1-201ENST00000249014 TMEM198Q66K66 360 aa19.72■□□□□ 0.75
CDC42EP1-201ENST00000249014 CAPRIN2Q6IMN6 1127 aaKnown RBP19.72■□□□□ 0.75
CDC42EP1-201ENST00000249014 FBXW8Q8N3Y1 598 aa19.72■□□□□ 0.75
CDC42EP1-201ENST00000249014 CCNYL1Q8N7R7 359 aa19.72■□□□□ 0.75
CDC42EP1-201ENST00000249014 LINC01599Q8WXQ3 324 aa19.72■□□□□ 0.75
CDC42EP1-201ENST00000249014 OLFM1Q99784 485 aa19.72■□□□□ 0.75
CDC42EP1-201ENST00000249014 DPPA5A6NC42 116 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 TMEM233B4DJY2 109 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 BUD23O43709 281 aaKnown RBP19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 RENBPP51606 427 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 NDST2P52849 883 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 POU4F1Q01851 419 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 DSC2Q02487 901 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 ITKQ08881 620 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 EFEMP1Q12805 493 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 MBTPS1Q14703 1052 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 IZUMO2Q6UXV1 221 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 DCP1BQ8IZD4 617 aaKnown RBP19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 SLC26A7Q8TE54 656 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 SPDL1Q96EA4 605 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 ZYG11BQ9C0D3 744 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 ZNF385DQ9H6B1 395 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 IGSF5Q9NSI5 407 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 FNIP2Q9P278 1114 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 HEATR9A2RTY3 570 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 NEMP2A6NFY4 417 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 CA12O43570 354 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 RHOQP17081 205 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 MTTPP55157 894 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 PDCD2Q16342 344 aaPredicted RBP19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 SNX32Q86XE0 403 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 KDM1BQ8NB78 822 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 OR13J1Q8NGT2 312 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 IGSF8Q969P0 613 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 PSMG2Q969U7 264 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 PABPC5Q96DU9 382 aaKnown RBP19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 C8orf48Q96LL4 319 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 MRPL57Q9BQC6 102 aaKnown RBP19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 TMEM248Q9NWD8 314 aa19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.71■□□□□ 0.75
CDC42EP1-201ENST00000249014 A0A087X1B8 175 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 AIM2O14862 343 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 CKBP12277 381 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 PRKAR2AP13861 404 aaKnown RBP19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 ELNP15502 786 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 CST5P28325 142 aaPredicted RBP19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 SERPINH1P50454 418 aaKnown RBP19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 CSHL1Q14406 222 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 MARC1Q5VT66 337 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 TMEM154Q6P9G4 183 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 ADGRG6Q86SQ4 1221 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 ATAD1Q8NBU5 361 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 HIPK4Q8NE63 616 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 FUBP3Q96I24 572 aaKnown RBP eCLIP19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 CATSPER2Q96P56 530 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 FBXO44Q9H4M3 255 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 POMKQ9H5K3 350 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 VTI1BQ9UEU0 232 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 PACSIN3Q9UKS6 424 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 RGSL1A5PLK6 1076 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 SOAT2O75908 522 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 LINGO3P0C6S8 592 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 THRAP10827 490 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 SLC2A3P11169 496 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 NUDT2P50583 147 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 SLC12A2P55011 1212 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 VARS2Q5ST30 1063 aaKnown RBP19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 TRAF7Q6Q0C0 670 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 KIAA0408Q6ZU52 694 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 ACAD11Q709F0 780 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 SLC24A5Q71RS6 500 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 DHDDSQ86SQ9 333 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 CPSF7Q8N684 471 aaKnown RBP19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 PDCD6IPQ8WUM4 868 aaKnown RBP19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 MARK4Q96L34 752 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 CLIC5Q9NZA1 410 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 SUFUQ9UMX1 484 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 CDYLQ9Y232 598 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 SQORQ9Y6N5 450 aa19.7■□□□□ 0.74
CDC42EP1-201ENST00000249014 SLCO1B7G3V0H7 640 aa19.69■□□□□ 0.74
CDC42EP1-201ENST00000249014 TMEM189-UBE2V1I3L0A0 370 aa19.69■□□□□ 0.74
CDC42EP1-201ENST00000249014 CCL22O00626 93 aa19.69■□□□□ 0.74
CDC42EP1-201ENST00000249014 EOMESO95936 686 aa19.69■□□□□ 0.74
CDC42EP1-201ENST00000249014 KCNA5P22460 613 aa19.69■□□□□ 0.74
CDC42EP1-201ENST00000249014 PPARGP37231 505 aaPredicted RBP19.69■□□□□ 0.74
CDC42EP1-201ENST00000249014 DSG1Q02413 1049 aa19.69■□□□□ 0.74
CDC42EP1-201ENST00000249014 SREBF2Q12772 1141 aa19.69■□□□□ 0.74
CDC42EP1-201ENST00000249014 CDC16Q13042 620 aa19.69■□□□□ 0.74
CDC42EP1-201ENST00000249014 NFE2Q16621 373 aaPredicted RBP19.69■□□□□ 0.74
CDC42EP1-201ENST00000249014 FBXL22Q6P050 247 aa19.69■□□□□ 0.74
CDC42EP1-201ENST00000249014 TRIM67Q6ZTA4 783 aa19.69■□□□□ 0.74
CDC42EP1-201ENST00000249014 PGBD5Q8N414 524 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms