RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 GARSP41250 739 aaKnown RBP12.92□□□□□ -0.34
VPREB3-201ENST00000248948 CCT8P50990 548 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 NOVA1P51513 510 aaKnown RBP12.92□□□□□ -0.34
VPREB3-201ENST00000248948 NXPH1P58417 271 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 ELP6Q0PNE2 266 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 MMRN1Q13201 1228 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 HLA-BQ31612 363 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 RALGPS1Q5JS13 557 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 CFAP58Q5T655 872 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 TIGD7Q6NT04 549 aaPredicted RBP12.92□□□□□ -0.34
VPREB3-201ENST00000248948 LAYNQ6UX15 382 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 TP53INP2Q8IXH6 220 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 RHOT1Q8IXI2 618 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 TSEN2Q8NCE0 465 aaKnown RBP12.92□□□□□ -0.34
VPREB3-201ENST00000248948 DENND6BQ8NEG7 585 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 OR2I1PQ8NGU4 316 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 ASB12Q8WXK4 309 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 SPOCK2Q92563 424 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 ECHDC3Q96DC8 303 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 MGME1Q9BQP7 344 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 GDF3Q9NR23 364 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 HAUS2Q9NVX0 235 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 DDX56Q9NY93 547 aaKnown RBP12.92□□□□□ -0.34
VPREB3-201ENST00000248948 ZFR2Q9UPR6 939 aaKnown RBP12.92□□□□□ -0.34
VPREB3-201ENST00000248948 FNDC3AQ9Y2H6 1198 aaKnown RBP12.92□□□□□ -0.34
VPREB3-201ENST00000248948 PCDHA13Q9Y5I0 950 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 SNX11Q9Y5W9 270 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 CABIN1Q9Y6J0 2220 aa12.92□□□□□ -0.34
VPREB3-201ENST00000248948 KNL1Q8NG31 2342 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.91□□□□□ -0.34
VPREB3-201ENST00000248948 A0A1W2PQ67 120 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 LRRD1A4D1F6 860 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 SOWAHDA6NJG2 315 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 INSIG1O15503 277 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 FLRT2O43155 660 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 SPOPO43791 374 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 SOCS5O75159 536 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 KCNK5O95279 499 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 PIGNO95427 931 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 KRT1P04264 644 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 WNT1P04628 370 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 CD59P13987 128 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 MX2P20592 715 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 KDELR1P24390 212 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 RGRP47804 291 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 SLC10A7Q0GE19 358 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 STAT4Q14765 748 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 INAVAQ3KP66 663 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 ATP13A4Q4VNC1 1196 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 ZFYVE27Q5T4F4 411 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 SEL1L3Q68CR1 1132 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 PSAPL1Q6NUJ1 521 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 SRLQ86TD4 932 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 NAXDQ8IW45 347 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 NETO2Q8NC67 525 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 HDAC11Q96DB2 347 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 ZNF830Q96NB3 372 aaPredicted RBP12.91□□□□□ -0.34
VPREB3-201ENST00000248948 ELF4Q99607 663 aaPredicted RBP12.91□□□□□ -0.34
VPREB3-201ENST00000248948 SUV39H2Q9H5I1 410 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 ERVMER34-1Q9H9K5 563 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 TM7SF3Q9NS93 570 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 AMACRQ9UHK6 382 aa12.91□□□□□ -0.34
VPREB3-201ENST00000248948 EPN1Q9Y6I3 576 aaPredicted RBP12.91□□□□□ -0.34
VPREB3-201ENST00000248948 A0A1B0GTQ1 180 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 PCNX2A6NKB5 2137 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 C3orf70A6NLC5 250 aaPredicted RBP12.9□□□□□ -0.34
VPREB3-201ENST00000248948 A6NNZ2 444 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 BTNL10A8MVZ5 291 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 TLR4O00206 839 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 NEMP1O14524 444 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 WNT9AO14904 365 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 MUSKO15146 869 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 PCDHGA12O60330 932 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 BUB1BO60566 1050 aaPredicted RBP12.9□□□□□ -0.34
VPREB3-201ENST00000248948 ADRB1P08588 477 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 PRLRP16471 622 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 CR2P20023 1033 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 XPAP23025 273 aaPredicted RBP12.9□□□□□ -0.34
VPREB3-201ENST00000248948 MMP13P45452 471 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 NOP2P46087 812 aaKnown RBP12.9□□□□□ -0.34
VPREB3-201ENST00000248948 BCL2L1Q07817 233 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 IFI16Q16666 785 aaKnown RBP12.9□□□□□ -0.34
VPREB3-201ENST00000248948 MARC1Q5VT66 337 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 SLC9A4Q6AI14 798 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 ALG1LQ6GMV1 187 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 ERAP2Q6P179 960 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 KYAT3Q6YP21 454 aaKnown RBP12.9□□□□□ -0.34
VPREB3-201ENST00000248948 ABI3BPQ7Z7G0 1075 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 TMEM139Q8IV31 216 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 TXLNBQ8N3L3 684 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 TEX26Q8N6G2 289 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 PQLC3Q8N755 202 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.9□□□□□ -0.34
VPREB3-201ENST00000248948 RAPGEF5Q92565 580 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 MAML1Q92585 1016 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 FEM1CQ96JP0 617 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 TSGA13Q96PP4 275 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 RNF157Q96PX1 679 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 NUDCD1Q96RS6 583 aa12.9□□□□□ -0.34
VPREB3-201ENST00000248948 BAG1Q99933 345 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms