RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 MROH6A6NGR9 719 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 EPOPA6NHQ4 379 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 TRIM49D1C9J1S8 452 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 PIAS1O75925 651 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 ERVK-10P10266 1014 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 HOXB8P17481 243 aaPredicted RBP14.32□□□□□ -0.12
SDF2-201ENST00000247020 FSHRP23945 695 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 CD70P32970 193 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 HADHAP40939 763 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 CHRNA4P43681 627 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 RGRP47804 291 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 ACVR1Q04771 509 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 PITRM1Q5JRX3 1037 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 TSTD2Q5T7W7 516 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 CES3Q6UWW8 571 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 TMC5Q6UXY8 1006 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 SH2D5Q6ZV89 423 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 KIAA0907Q7Z7F0 614 aaPredicted RBP14.32□□□□□ -0.12
SDF2-201ENST00000247020 TMEM25Q86YD3 366 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 UNC5BQ8IZJ1 945 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 ADGRG2Q8IZP9 1017 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 SLC25A41Q8N5S1 370 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 BANPQ8N9N5 519 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 MDM1Q8TC05 714 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 CALML6Q8TD86 181 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 BRSK1Q8TDC3 778 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 DENND1AQ8TEH3 1009 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 ING5Q8WYH8 240 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 ISL2Q96A47 359 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 TIFAQ96CG3 184 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 APOPT1Q96IL0 206 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 RBBP8Q99708 897 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 FAM167BQ9BTA0 163 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 BBS2Q9BXC9 721 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 ADGRE3Q9BY15 652 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 EPN3Q9H201 632 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 PLK2Q9NYY3 685 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 LMCD1Q9NZU5 365 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 HS3ST2Q9Y278 367 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 ACTL7AQ9Y615 435 aa14.32□□□□□ -0.12
SDF2-201ENST00000247020 CHD7Q9P2D1 2997 aa14.31□□□□□ -0.12
SDF2-201ENST00000247020 TIMM44O43615 452 aa14.31□□□□□ -0.12
SDF2-201ENST00000247020 IGSF6O95976 241 aa14.31□□□□□ -0.12
SDF2-201ENST00000247020 TYRP14679 529 aa14.31□□□□□ -0.12
SDF2-201ENST00000247020 HLA-FP30511 346 aa14.31□□□□□ -0.12
SDF2-201ENST00000247020 ARCN1P48444 511 aaKnown RBP14.31□□□□□ -0.12
SDF2-201ENST00000247020 POLD2P49005 469 aa14.31□□□□□ -0.12
SDF2-201ENST00000247020 VASPP50552 380 aaPredicted RBP14.31□□□□□ -0.12
SDF2-201ENST00000247020 COL13A1Q5TAT6 717 aaPredicted RBP14.31□□□□□ -0.12
SDF2-201ENST00000247020 KIAA0408Q6ZU52 694 aa14.31□□□□□ -0.12
SDF2-201ENST00000247020 GALNT7Q86SF2 657 aa14.31□□□□□ -0.12
SDF2-201ENST00000247020 SRLQ86TD4 932 aa14.31□□□□□ -0.12
SDF2-201ENST00000247020 NPAS3Q8IXF0 933 aa14.31□□□□□ -0.12
SDF2-201ENST00000247020 C4orf33Q8N1A6 199 aa14.31□□□□□ -0.12
SDF2-201ENST00000247020 C12orf76Q8N812 135 aaPredicted RBP14.31□□□□□ -0.12
SDF2-201ENST00000247020 OSCP1Q8WVF1 389 aa14.31□□□□□ -0.12
SDF2-201ENST00000247020 SMARCD2Q92925 531 aa14.31□□□□□ -0.12
SDF2-201ENST00000247020 BHMTQ93088 406 aa14.31□□□□□ -0.12
SDF2-201ENST00000247020 E2F7Q96AV8 911 aa14.31□□□□□ -0.12
SDF2-201ENST00000247020 CEP44Q9C0F1 390 aa14.31□□□□□ -0.12
SDF2-201ENST00000247020 SLC25A13Q9UJS0 675 aa14.31□□□□□ -0.12
SDF2-201ENST00000247020 GGA2Q9UJY4 613 aa14.31□□□□□ -0.12
SDF2-201ENST00000247020 FBXO10Q9UK96 956 aa14.31□□□□□ -0.12
SDF2-201ENST00000247020 INTS6Q9UL03 887 aaKnown RBP14.31□□□□□ -0.12
SDF2-201ENST00000247020 CLEC4EQ9ULY5 219 aa14.31□□□□□ -0.12
SDF2-201ENST00000247020 RAI2Q9Y5P3 530 aa14.31□□□□□ -0.12
SDF2-201ENST00000247020 NEDD8-MDP1E9PL57 170 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 SLC7A4O43246 635 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 UGT1A9O60656 530 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 SOCS5O75159 536 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 RFPL1O75677 317 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 CRTAMO95727 393 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 ITGA2BP08514 1039 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 PABPC1P11940 636 aaKnown RBP14.3□□□□□ -0.12
SDF2-201ENST00000247020 LIMK2P53671 638 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 RPL26P61254 145 aaKnown RBP14.3□□□□□ -0.12
SDF2-201ENST00000247020 PDE1BQ01064 536 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 IL9RQ01113 521 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 SEPT6Q14141 434 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 HSP90AA5PQ58FG0 334 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 LY6G5CQ5SRR4 150 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 RARS2Q5T160 578 aaKnown RBP14.3□□□□□ -0.12
SDF2-201ENST00000247020 ESRP1Q6NXG1 681 aaKnown RBP14.3□□□□□ -0.12
SDF2-201ENST00000247020 ANKRD54Q6NXT1 300 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 LINGO4Q6UY18 593 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 KDELC2Q7Z4H8 507 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 AHI1Q8N157 1196 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 STYXQ8WUJ0 223 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 DYDC1Q8WWB3 177 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 SCG3Q8WXD2 468 aaKnown RBP14.3□□□□□ -0.12
SDF2-201ENST00000247020 SERAC1Q96JX3 654 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 CABS1Q96KC9 395 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 ZNF778Q96MU6 729 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 ASB16Q96NS5 453 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 SRPK1Q96SB4 655 aaKnown RBP14.3□□□□□ -0.12
SDF2-201ENST00000247020 C19orf43Q9BQ61 176 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 MCMBPQ9BTE3 642 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 UGT1A7Q9HAW7 530 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 UGT1A10Q9HAW8 530 aa14.3□□□□□ -0.12
SDF2-201ENST00000247020 UGT1A8Q9HAW9 530 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms