RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 RFWD2Q8NHY2 731 aa8.78□□□□□ -1
VPS4B-201ENST00000238497 KCNV2Q8TDN2 545 aa8.78□□□□□ -1
VPS4B-201ENST00000238497 OSCP1Q8WVF1 389 aa8.78□□□□□ -1
VPS4B-201ENST00000238497 CCT6BQ92526 530 aa8.78□□□□□ -1
VPS4B-201ENST00000238497 MFSD3Q96ES6 412 aa8.78□□□□□ -1
VPS4B-201ENST00000238497 EPAS1Q99814 870 aa8.78□□□□□ -1
VPS4B-201ENST00000238497 CAB39LQ9H9S4 337 aa8.78□□□□□ -1
VPS4B-201ENST00000238497 ZDHHC4Q9NPG8 344 aa8.78□□□□□ -1
VPS4B-201ENST00000238497 FBXO6Q9NRD1 293 aaPredicted RBP8.78□□□□□ -1
VPS4B-201ENST00000238497 SLC24A2Q9UI40 661 aa8.78□□□□□ -1
VPS4B-201ENST00000238497 ARHGAP26Q9UNA1 814 aa8.78□□□□□ -1
VPS4B-201ENST00000238497 SMG5Q9UPR3 1016 aaKnown RBP8.78□□□□□ -1
VPS4B-201ENST00000238497 L3MBTL1Q9Y468 752 aa8.78□□□□□ -1
VPS4B-201ENST00000238497 FRYLO94915 3013 aa8.77□□□□□ -1
VPS4B-201ENST00000238497 A0A1W2PQH9 124 aa8.77□□□□□ -1
VPS4B-201ENST00000238497 GALK1P51570 392 aa8.77□□□□□ -1
VPS4B-201ENST00000238497 SATB1Q01826 763 aa8.77□□□□□ -1
VPS4B-201ENST00000238497 KCNJ11Q14654 390 aa8.77□□□□□ -1
VPS4B-201ENST00000238497 DPYSL2Q16555 572 aa8.77□□□□□ -1
VPS4B-201ENST00000238497 CEP68Q76N32 757 aa8.77□□□□□ -1
VPS4B-201ENST00000238497 TAC4Q86UU9 113 aa8.77□□□□□ -1
VPS4B-201ENST00000238497 CDKL2Q92772 493 aa8.77□□□□□ -1
VPS4B-201ENST00000238497 SGF29Q96ES7 293 aa8.77□□□□□ -1
VPS4B-201ENST00000238497 SCYL1Q96KG9 808 aa8.77□□□□□ -1
VPS4B-201ENST00000238497 MYLK2Q9H1R3 596 aa8.77□□□□□ -1
VPS4B-201ENST00000238497 FBRSL1Q9HCM7 1045 aaKnown RBP8.77□□□□□ -1
VPS4B-201ENST00000238497 DLGAP2Q9P1A6 1054 aa8.77□□□□□ -1
VPS4B-201ENST00000238497 PSAT1Q9Y617 370 aa8.77□□□□□ -1
VPS4B-201ENST00000238497 A0A0A0MRY4 1105 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 FAM237BA0A1B0GVD1 139 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 SDR42E2A6NKP2 422 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 CCL22O00626 93 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 SLC9A3R1O14745 358 aaPredicted RBP8.77□□□□□ -1.01
VPS4B-201ENST00000238497 ASMTLO95671 621 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 CHRNB1P11230 501 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 NFKB1P19838 968 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 HOXD11P31277 338 aaPredicted RBP8.77□□□□□ -1.01
VPS4B-201ENST00000238497 ATP5C1P36542 298 aaKnown RBP8.77□□□□□ -1.01
VPS4B-201ENST00000238497 PTPN9P43378 593 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 PPP3CCP48454 512 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 KDSRQ06136 332 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 ZNF77Q15935 545 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 BZW1Q7L1Q6 419 aaKnown RBP8.77□□□□□ -1.01
VPS4B-201ENST00000238497 PIGWQ7Z7B1 504 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 CIR1Q86X95 450 aaPredicted RBP8.77□□□□□ -1.01
VPS4B-201ENST00000238497 DCAKDQ8WVC6 231 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 SPATA13Q96N96 652 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 AGAP2Q99490 1192 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 OSBPL6Q9BZF3 934 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 CHRDQ9H2X0 955 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 CHRAC1Q9NRG0 131 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 C20orf96Q9NUD7 363 aaPredicted RBP8.77□□□□□ -1.01
VPS4B-201ENST00000238497 BFARQ9NZS9 450 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 PPARGC1AQ9UBK2 798 aaKnown RBP8.77□□□□□ -1.01
VPS4B-201ENST00000238497 HEY2Q9UBP5 337 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 LSM7Q9UK45 103 aaKnown RBP8.77□□□□□ -1.01
VPS4B-201ENST00000238497 SLC8A2Q9UPR5 921 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 TEX264Q9Y6I9 313 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 CHURC1-FNTBB4DL54 471 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 ENDOD1O94919 500 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 EGFP01133 1207 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 LMNAP02545 664 aaKnown RBP8.77□□□□□ -1.01
VPS4B-201ENST00000238497 HOXC13P31276 330 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 FNTBP49356 437 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 CCR3P51677 355 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 DLG2Q15700 870 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 TAF1BQ53T94 588 aaPredicted RBP8.77□□□□□ -1.01
VPS4B-201ENST00000238497 DGKKQ5KSL6 1271 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 TTC39BQ5VTQ0 682 aaPredicted RBP8.77□□□□□ -1.01
VPS4B-201ENST00000238497 SLC9A4Q6AI14 798 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 CYB5D1Q6P9G0 228 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 ADGRD1Q6QNK2 874 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 C6orf89Q6UWU4 347 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 CNPY4Q8N129 248 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 DCLK2Q8N568 766 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 NPWQ8N729 165 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 SPON2Q9BUD6 331 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 TTLL2Q9BWV7 592 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 TRIM55Q9BYV6 548 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 PLK2Q9NYY3 685 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 ZFP69BQ9UJL9 534 aa8.77□□□□□ -1.01
VPS4B-201ENST00000238497 TBC1D3BA6NDS4 549 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 I6L893 689 aaPredicted RBP8.76□□□□□ -1.01
VPS4B-201ENST00000238497 ARNTLO00327 626 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 FYNP06241 537 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 ABHD2P08910 425 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 TUBP50607 506 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 ARFIP2P53365 341 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 ZXDBP98169 803 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 LY6G5CQ5SRR4 150 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 EMC10Q5UCC4 262 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 STRADAQ7RTN6 431 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 NLRP9Q7RTR0 991 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 PGBD3Q8N328 593 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 RIBC1Q8N443 379 aaPredicted RBP8.76□□□□□ -1.01
VPS4B-201ENST00000238497 STK32AQ8WU08 396 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 TEKT4Q8WW24 435 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 EBNA1BP2Q99848 306 aaKnown RBP8.76□□□□□ -1.01
VPS4B-201ENST00000238497 NMUR1Q9HB89 426 aa8.76□□□□□ -1.01
VPS4B-201ENST00000238497 TRPV5Q9NQA5 729 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms