RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 CYTH4Q9UIA0 394 aa13.86□□□□□ -0.19
NFKB1-201ENST00000226574 ZNF180Q9UJW8 692 aa13.86□□□□□ -0.19
NFKB1-201ENST00000226574 ABT1Q9ULW3 272 aaKnown RBP13.86□□□□□ -0.19
NFKB1-201ENST00000226574 DGKBQ9Y6T7 804 aa13.86□□□□□ -0.19
NFKB1-201ENST00000226574 SMIM28A0A1B0GU29 152 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 TTC24A2A3L6 582 aaPredicted RBP13.85□□□□□ -0.19
NFKB1-201ENST00000226574 H3BSA7 217 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 ABLIM1O14639 778 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 LRIG2O94898 1065 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 LBPP18428 481 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 YAP1P46937 504 aaKnown RBP13.85□□□□□ -0.19
NFKB1-201ENST00000226574 LIMK2P53671 638 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 NAA20P61599 178 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 GALNT3Q14435 633 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 POLD3Q15054 466 aaPredicted RBP13.85□□□□□ -0.19
NFKB1-201ENST00000226574 FAM98BQ52LJ0 330 aaKnown RBP13.85□□□□□ -0.19
NFKB1-201ENST00000226574 ARHGAP36Q6ZRI8 547 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 UNC93AQ86WB7 457 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 RBBP8Q99708 897 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 C9orf16Q9BUW7 83 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 C6orf62Q9GZU0 229 aaPredicted RBP13.85□□□□□ -0.19
NFKB1-201ENST00000226574 NOL6Q9H6R4 1146 aaKnown RBP13.85□□□□□ -0.19
NFKB1-201ENST00000226574 PARVBQ9HBI1 364 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 SSU72Q9NP77 194 aaKnown RBP13.85□□□□□ -0.19
NFKB1-201ENST00000226574 UXTQ9UBK9 157 aaPredicted RBP13.85□□□□□ -0.19
NFKB1-201ENST00000226574 ANAPC2Q9UJX6 822 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 YJEFN3A6XGL0 299 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 SEC22BO75396 215 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 ARIH2O95376 493 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 CRTAMO95727 393 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 OR4Q2P0C623 313 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 ITGAXP20702 1163 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 HARS2P49590 506 aaKnown RBP13.85□□□□□ -0.19
NFKB1-201ENST00000226574 CCT8P50990 548 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 TBX4P57082 545 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 PTPRNQ16849 979 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 CCDC142Q17RM4 750 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 SLC39A12Q504Y0 691 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 ZNF280DQ6N043 979 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 CAND1Q86VP6 1230 aaKnown RBP13.85□□□□□ -0.19
NFKB1-201ENST00000226574 COLEC11Q9BWP8 271 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 DPY30Q9C005 99 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 PREBQ9HCU5 417 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 IMPAD1Q9NX62 359 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 STK39Q9UEW8 545 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 PRPF19Q9UMS4 504 aaKnown RBP13.85□□□□□ -0.19
NFKB1-201ENST00000226574 VWA7Q9Y334 891 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 FAM32AQ9Y421 112 aaKnown RBP13.85□□□□□ -0.19
NFKB1-201ENST00000226574 A0A0J9YYE9 177 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 TPSB2P20231 275 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 L1CAMP32004 1257 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 PITX1P78337 314 aaPredicted RBP13.85□□□□□ -0.19
NFKB1-201ENST00000226574 ZNF252P-AS1Q0IIN9 211 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 TPSAB1Q15661 275 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 NOMO2Q5JPE7 1267 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 GCNT7Q6ZNI0 430 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 UBR7Q8N806 425 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 CRYGNQ8WXF5 182 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 KLRG1Q96E93 195 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 MCRS1Q96EZ8 462 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 SMARCD1Q96GM5 515 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 TRIM8Q9BZR9 551 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 MRGBPQ9NV56 204 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 EIF3LQ9Y262 564 aaKnown RBP13.85□□□□□ -0.19
NFKB1-201ENST00000226574 FOXD2O60548 495 aaPredicted RBP13.85□□□□□ -0.19
NFKB1-201ENST00000226574 RFPL1O75677 317 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 RTN3O95197 1032 aaPredicted RBP13.85□□□□□ -0.19
NFKB1-201ENST00000226574 KCNJ11Q14654 390 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 CCDC92Q53HC0 331 aaPredicted RBP13.85□□□□□ -0.19
NFKB1-201ENST00000226574 IL23RQ5VWK5 629 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 SCARA3Q6AZY7 606 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 ATP6V0D2Q8N8Y2 350 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 SIGLEC10Q96LC7 697 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 MRPL57Q9BQC6 102 aaKnown RBP13.85□□□□□ -0.19
NFKB1-201ENST00000226574 SYT11Q9BT88 431 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 ENTPD7Q9NQZ7 604 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.85□□□□□ -0.19
NFKB1-201ENST00000226574 PCDHB12Q9Y5F1 795 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 FADS3Q9Y5Q0 445 aa13.85□□□□□ -0.19
NFKB1-201ENST00000226574 CYP4B1P13584 511 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 ZNF618Q5T7W0 954 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 RNF219Q5W0B1 726 aaPredicted RBP13.84□□□□□ -0.19
NFKB1-201ENST00000226574 C9orf57Q5W0N0 161 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 CLHC1Q8NHS4 586 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 CLPBQ9H078 707 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 KLQ9UEF7 1012 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 SLC13A4Q9UKG4 626 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.84□□□□□ -0.19
NFKB1-201ENST00000226574 LOC100506127A0A0U1RQW1 187 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 A0A1B0GVG6 124 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 MYBPHLA2RUH7 354 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 F5H5T6 163 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 PDHXO00330 501 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 MYO1DO94832 1006 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 ZNF177Q13360 481 aaPredicted RBP13.84□□□□□ -0.19
NFKB1-201ENST00000226574 SPIDRQ14159 915 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 CXCL17Q6UXB2 119 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 C16orf59Q7L2K0 433 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 TPD52L3Q96J77 140 aa13.84□□□□□ -0.19
NFKB1-201ENST00000226574 ALG2Q9H553 416 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms