RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 RAP2CQ9Y3L5 183 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 HTTP42858 3142 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 BRCA2P51587 3418 aa8.34□□□□□ -1.07
VAMP3-201ENST00000054666 SLCO1B7G3V0H7 640 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 H0Y3Z8 333 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 SLC7A4O43246 635 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 ACSL4O60488 711 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 MAGEC1O60732 1142 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 PRAMEF11O60813 436 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 ENTPD5O75356 428 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 SNUPNO95149 360 aaKnown RBP8.33□□□□□ -1.08
VAMP3-201ENST00000054666 VNN2O95498 520 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 SERPINF2P08697 491 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 NCF2P19878 526 aaPredicted RBP8.33□□□□□ -1.08
VAMP3-201ENST00000054666 ARRB2P32121 409 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 GRIA4P48058 902 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 USP4Q13107 963 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 TUBB3Q13509 450 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 ZNF460Q14592 562 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 TAF12Q16514 161 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 FAM83EQ2M2I3 478 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 SIRPB2Q5JXA9 342 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 AGAP9Q5VTM2 703 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 SEL1L3Q68CR1 1132 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 SLC8B1Q6J4K2 584 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 RFWD3Q6PCD5 774 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 NAPRTQ6XQN6 538 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 MAVSQ7Z434 540 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 GALNT7Q86SF2 657 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 TMEM173Q86WV6 379 aaPredicted RBP8.33□□□□□ -1.08
VAMP3-201ENST00000054666 ENDOVQ8N8Q3 282 aaKnown RBP8.33□□□□□ -1.08
VAMP3-201ENST00000054666 OR6P1Q8NGX9 317 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 GIMAP7Q8NHV1 300 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 AGR3Q8TD06 166 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 CMTM5Q96DZ9 223 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 FEM1CQ96JP0 617 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 ANKRD27Q96NW4 1050 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 SEMA3CQ99985 751 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 MRPL57Q9BQC6 102 aaKnown RBP8.33□□□□□ -1.08
VAMP3-201ENST00000054666 DRC3Q9H069 523 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 C1orf21Q9H246 121 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 MFSD1Q9H3U5 465 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 HIPK3Q9H422 1215 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 RETREG1Q9H6L5 497 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 COG4Q9H9E3 785 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 MTRRQ9UBK8 725 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 ZNF212Q9UDV6 495 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 CEP350Q5VT06 3117 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.33□□□□□ -1.08
VAMP3-201ENST00000054666 MMP2P08253 660 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 TPBGLP0DKB5 382 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 ACVRL1P37023 503 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 LEPRP48357 1165 aaKnown RBP8.33□□□□□ -1.08
VAMP3-201ENST00000054666 KCNQ1P51787 676 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 CDH4P55283 916 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 TAS2R39P59534 338 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 GPNMBQ14956 572 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 KPNB1Q14974 876 aaKnown RBP8.33□□□□□ -1.08
VAMP3-201ENST00000054666 HECTD3Q5T447 861 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 IL31Q6EBC2 164 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 NADSYN1Q6IA69 706 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 ACAD11Q709F0 780 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 TMC7Q7Z402 723 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 CEP97Q8IW35 865 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 SCUBE1Q8IWY4 988 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 AFAP1L2Q8N4X5 818 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 CFAP61Q8NHU2 1237 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 PLD4Q96BZ4 506 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 NXNL1Q96CM4 212 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 CCDC126Q96EE4 140 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 SCLYQ96I15 445 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 CINPQ9BW66 212 aaPredicted RBP8.33□□□□□ -1.08
VAMP3-201ENST00000054666 MAGEH1Q9H213 219 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 TCF7L2Q9NQB0 619 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.33□□□□□ -1.08
VAMP3-201ENST00000054666 NCKIPSDQ9NZQ3 722 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.33□□□□□ -1.08
VAMP3-201ENST00000054666 STOML1Q9UBI4 398 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 VTI1BQ9UEU0 232 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 SEPT3Q9UH03 358 aa8.33□□□□□ -1.08
VAMP3-201ENST00000054666 TET1Q8NFU7 2136 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.32□□□□□ -1.08
VAMP3-201ENST00000054666 MEI4A8MW99 385 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 HDAC3O15379 428 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 TM7SF2O76062 418 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 PIGNO95427 931 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 GM2AP17900 193 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 MPSTP25325 297 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 OR1D2P34982 312 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 MAP2K2P36507 400 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 SERPINB5P36952 375 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 RPL14P50914 215 aaKnown RBP8.32□□□□□ -1.08
VAMP3-201ENST00000054666 RAP1GDS1P52306 607 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 NAGLUP54802 743 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 OXCT1P55809 520 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 GNA12Q03113 381 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 CSHL1Q14406 222 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 VEPH1Q14D04 833 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 TRMT5Q32P41 509 aaKnown RBP8.32□□□□□ -1.08
VAMP3-201ENST00000054666 SPOUT1Q5T280 376 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms