RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Ppp6r2Q8R3Q2 923 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Olfr784Q8VFZ9 319 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Snrnp25Q8VIK1 123 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Actr3Q99JY9 418 aaKnown RBP10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Snrnp48Q9D361 337 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Gsdmdc1Q9D8T2 487 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ift46Q9DB07 301 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ddx59Q9DBN9 619 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Hes6Q9JHE6 224 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Aldh1a3Q9JHW9 512 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 B4galt4Q9JJ04 344 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 H2afb2S4R1M3 115 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Gm28363A0A087WQW2 129 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Lrrc73B2RWC4 316 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 1700064H15RikD3Z4D4 81 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Pdia2D3Z6P0 527 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 MttpO08601 894 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Olfm1O88998 485 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 BrafP28028 804 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Itga11P61622 1188 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Lcp2Q60787 533 aaKnown RBP10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Glt8d2Q640P4 349 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ggnbp1Q6K1E7 370 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 RragdQ7TT45 449 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Tspan18Q80WR1 248 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Arhgap25Q8BYW1 648 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 CherpQ8CGZ0 936 aaKnown RBP10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Olfr695Q8VFM3 315 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Gtf2ird2Q99NI3 936 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Pbld2Q9CXN7 288 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Atp5oQ9DB20 213 aaKnown RBP10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 RhojQ9ER71 214 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Sptlc1O35704 473 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Banf1O54962 89 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Rps6ka3P18654 740 aaKnown RBP10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ccdc61Q3UJV1 511 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Slfn4Q3UV66 602 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Vps51Q3UVL4 782 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Cdc14bQ6PFY9 485 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Adam39Q7M762 756 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Abcg2Q7TMS5 657 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Tmprss4Q8VCA5 435 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Slc35c2Q8VCX2 364 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Fig4Q91WF7 907 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 DeraQ91YP3 318 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Dusp21Q9D9D8 189 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Pop5Q9DB28 169 aa10.01□□□□□ -0.81
Ldlr-201ENSMUST00000034713 0610012G03RikA0A0J9YTR2 95 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Klhdc7aA2APT9 773 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ptchd4B9EKX1 904 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Gsg1l2M0QWL6 290 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 PenkP22005 268 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 TfamP40630 243 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ppp3cbP48453 525 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Akr1c6P70694 323 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Scube3Q66PY1 993 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Mvb12bQ6KAU4 317 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Mbtd1Q6P5G3 631 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Rad9bQ6WBX7 403 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Mtmr12Q80TA6 747 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Mup21Q80YX8 181 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Exoc3l1Q8BI71 739 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Dis3lQ8C0S1 1053 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Bdh2Q8JZV9 245 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Fam151aQ8QZW3 608 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Zdhhc12Q8VC90 267 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Klrb1fQ8VD98 217 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Slc25a3Q8VEM8 357 aaKnown RBP10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Q91Z58 1206 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Mtfr1Q99MB2 328 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ppil6Q9D6D8 278 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Fam45aQ9D8N2 357 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Vps35Q9EQH3 796 aaKnown RBP10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Gria3Q9Z2W9 888 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Gm6133B2RY53 190 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 AunipE9Q6Z5 340 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 LtfP08071 707 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Lsp1P19973 330 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 RxraP28700 467 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Plk2P53351 682 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Nploc4P60670 608 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Serpinb5P70124 375 aaKnown RBP10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ctc1Q5SUQ9 1212 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 BoraQ8BS90 525 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Pcyox1lQ8C7K6 495 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Mul1Q8VCM5 352 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Ogfod2Q9CQ04 349 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 S100pbpQ9D5K4 396 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Vwa7Q9JHA8 891 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 EmcnQ9R0H2 261 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Aqp5Q9WTY4 265 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 EXOC1LB9EK06 172 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Gm5930D3Z257 264 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Psmd7P26516 321 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 NadkP58058 439 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 IgfalsP70389 603 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Gpatch4Q3TFK5 415 aaKnown RBP10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Adora2aQ60613 410 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Tcf4Q60722 670 aa10□□□□□ -0.81
Ldlr-201ENSMUST00000034713 Xpnpep1Q6P1B1 623 aa10□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms