RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 NeproQ8R2U2 564 aa8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Ankrd54Q91WK7 299 aa8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 CygbQ9CX80 190 aa8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Katnal2Q9D3R6 539 aa8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Cldn22Q9D7U6 220 aa8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Tagln3Q9R1Q8 199 aa8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Daw1D3Z7A5 415 aa8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Erich1E9PY43 332 aa8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Pdzd7E9Q9W7 1021 aa8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Gm8334F7CD45 553 aa8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Ebf2O08792 575 aa8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Pim1P06803 397 aa8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Smpdl3bP58242 456 aa8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Gm8773Q3UQ24 132 aa8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Marveld2Q3UZP0 555 aa8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Eif2dQ61211 570 aaKnown RBP8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Ofcc1Q8BGX4 166 aa8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Fam78aQ8C552 283 aa8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 PvrQ8K094 408 aa8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Ttc4Q8R3H9 386 aa8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Mul1Q8VCM5 352 aa8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 NlnQ91YP2 704 aa8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Mrpl1Q99N96 336 aaKnown RBP8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 AenQ9CZI9 336 aaKnown RBP8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Q9D454 513 aa8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Chrna6Q9R0W9 494 aa8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Gria3Q9Z2W9 888 aa8.56□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Col4a5Q63ZW6 1691 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Pcna-ps2A0A140T8V5 261 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 L3mbtl1A2A5N8 826 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Limk2O54785 638 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Dmp1O55188 503 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 PargO88622 969 aaKnown RBP8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Il1aP01582 270 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 AlplP09242 524 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 PcnaP17918 261 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Rab3ipQ68EF0 428 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Naaladl1Q7M758 745 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Fastkd5Q7TMV3 762 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Olfr293Q7TS10 336 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Clec2eQ80XD9 204 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Tmem169Q8BG50 297 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 4933402J07RikQ8BHX0 270 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Mterf2Q8BKY8 385 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Clec4gQ8BNX1 294 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Prdm8Q8BZ97 687 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Vps37aQ8CHS8 397 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Nipsnap3bQ9CQE1 247 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Ndufb5Q9CQH3 189 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Kbtbd12Q9D618 625 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Gm3173A6NAS3 172 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Fbxl18E9PYR1 771 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Gm3020E9Q3J7 150 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Gm3336J3QMQ6 198 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Gm2897K7N6T7 172 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Pknox1O70477 436 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 LdhcP00342 332 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 GsrP47791 500 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Hoxb13P70321 286 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Ksr1Q61097 873 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Fam167aQ6P1G6 215 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Wwp1Q8BZZ3 918 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Gm3411Q8C7R2 150 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Nox1Q8CIZ9 591 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Nsl1Q8K305 281 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Lgals12Q91VD1 314 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Oas1cQ924S2 362 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Chrna4O70174 629 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Pde8aO88502 823 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Pms2P54279 859 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Lypla1P97823 230 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Adamts1P97857 968 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Zfp658Q5PPQ4 887 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Lcp2Q60787 533 aaKnown RBP8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Ago3Q8CJF9 860 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Prrg2Q8R182 198 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Plekha4Q8VC98 588 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Taf11Q99JX1 211 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 RhoaQ9QUI0 193 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 DgkeQ9R1C6 564 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Olfr1049A2ARZ0 308 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Pdzd8B9EJ80 1147 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Ccdc62E9PVD1 701 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Gm20509G3UZF1 325 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Ifnar2O35664 513 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Got2P05202 430 aaKnown RBP8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Cd4P06332 457 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Atxn1lP0C7T6 687 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Grb7Q03160 535 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Cd36Q08857 472 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Zfp217Q3U0X6 1041 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 P3h2Q8CG71 703 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Tcf7l2Q924A0 459 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Dpysl5Q9EQF6 564 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Gm3002E9PW72 216 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Gm8257E9Q8R3 264 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Acot8P58137 320 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Gsdmc2Q2KHK6 480 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 Colec11Q3SXB8 272 aa8.55□□□□□ -1.04
Sf3b1-201ENSMUST00000027127 CblbQ3TTA7 982 aa8.55□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms