RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 SLC1A5Q15758 541 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 PLEKHG6Q3KR16 790 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 SIRPB2Q5JXA9 342 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 SPANXN3Q5MJ09 141 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 CYS1Q717R9 158 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 LRRC6Q86X45 466 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 ASIC4Q96FT7 647 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 SPHK2Q9NRA0 654 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 ZMYM5Q9UJ78 669 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 PSAT1Q9Y617 370 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 CYBBP04839 570 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 ERVK-10P10266 1014 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 CTSOP43234 321 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-232ENST00000641947 SCNN1BP51168 640 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 GUCY1A3Q02108 690 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 MPP2Q14168 576 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 TERF2Q15554 542 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 FUT11Q495W5 492 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 FAM78AQ5JUQ0 283 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 LY6G5CQ5SRR4 150 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 TMEM184AQ6ZMB5 413 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 GPR149Q86SP6 731 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 ADGRG2Q8IZP9 1017 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 FGF13Q92913 245 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 TTC17Q96AE7 1141 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 CERS2Q96G23 380 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 TRIB3Q96RU7 358 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 BBS2Q9BXC9 721 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 NSUN3Q9H649 340 aaKnown RBP17.79■□□□□ 0.44
PHGDH-232ENST00000641947 ABCB8Q9NUT2 735 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 KIAA1522Q9P206 1035 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-232ENST00000641947 FAM169AQ9Y6X4 670 aa17.79■□□□□ 0.44
PHGDH-232ENST00000641947 KIAA1549LQ6ZVL6 1849 aa17.78■□□□□ 0.44
PHGDH-232ENST00000641947 AP3B1O00203 1094 aa17.78■□□□□ 0.44
PHGDH-232ENST00000641947 TRIM24O15164 1050 aa17.78■□□□□ 0.44
PHGDH-232ENST00000641947 INSIG1O15503 277 aa17.78■□□□□ 0.44
PHGDH-232ENST00000641947 TYRP14679 529 aa17.78■□□□□ 0.44
PHGDH-232ENST00000641947 FSHRP23945 695 aa17.78■□□□□ 0.44
PHGDH-232ENST00000641947 GALNT3Q14435 633 aa17.78■□□□□ 0.44
PHGDH-232ENST00000641947 INO80DQ53TQ3 878 aaPredicted RBP17.78■□□□□ 0.44
PHGDH-232ENST00000641947 PCID2Q5JVF3 399 aa17.78■□□□□ 0.44
PHGDH-232ENST00000641947 TRIM68Q6AZZ1 485 aa17.78■□□□□ 0.44
PHGDH-232ENST00000641947 GET4Q7L5D6 327 aaPredicted RBP17.78■□□□□ 0.44
PHGDH-232ENST00000641947 SLC26A11Q86WA9 606 aa17.78■□□□□ 0.44
PHGDH-232ENST00000641947 CCDC117Q8IWD4 279 aaPredicted RBP17.78■□□□□ 0.44
PHGDH-232ENST00000641947 TNS4Q8IZW8 715 aa17.78■□□□□ 0.44
PHGDH-232ENST00000641947 BBS5Q8N3I7 341 aa17.78■□□□□ 0.44
PHGDH-232ENST00000641947 CELF5Q8N6W0 485 aaKnown RBP17.78■□□□□ 0.44
PHGDH-232ENST00000641947 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.78■□□□□ 0.44
PHGDH-232ENST00000641947 FEM1CQ96JP0 617 aa17.78■□□□□ 0.44
PHGDH-232ENST00000641947 ASB16Q96NS5 453 aa17.78■□□□□ 0.44
PHGDH-232ENST00000641947 SELENOSQ9BQE4 189 aa17.78■□□□□ 0.44
PHGDH-232ENST00000641947 SLC2A6Q9UGQ3 507 aa17.78■□□□□ 0.44
PHGDH-232ENST00000641947 TCAF1Q9Y4C2 921 aa17.78■□□□□ 0.44
PHGDH-232ENST00000641947 HMX2A2RU54 273 aa17.77■□□□□ 0.44
PHGDH-232ENST00000641947 PRKCGP05129 697 aa17.77■□□□□ 0.44
PHGDH-232ENST00000641947 INHBAP08476 426 aa17.77■□□□□ 0.44
PHGDH-232ENST00000641947 SERPINF2P08697 491 aa17.77■□□□□ 0.44
PHGDH-232ENST00000641947 BMP1P13497 986 aa17.77■□□□□ 0.44
PHGDH-232ENST00000641947 KRT15P19012 456 aa17.77■□□□□ 0.44
PHGDH-232ENST00000641947 ATP5DP30049 168 aa17.77■□□□□ 0.44
PHGDH-232ENST00000641947 WEE1P30291 646 aa17.77■□□□□ 0.44
PHGDH-232ENST00000641947 PLK1P53350 603 aa17.77■□□□□ 0.44
PHGDH-232ENST00000641947 GABPB1Q06547 395 aaPredicted RBP17.77■□□□□ 0.44
PHGDH-232ENST00000641947 CDK18Q07002 472 aa17.77■□□□□ 0.44
PHGDH-232ENST00000641947 PITRM1Q5JRX3 1037 aa17.77■□□□□ 0.44
PHGDH-232ENST00000641947 ATXN7L2Q5T6C5 722 aaPredicted RBP17.77■□□□□ 0.44
PHGDH-232ENST00000641947 ANKRD54Q6NXT1 300 aa17.77■□□□□ 0.44
PHGDH-232ENST00000641947 PKN3Q6P5Z2 889 aa17.77■□□□□ 0.44
PHGDH-232ENST00000641947 MARK2Q7KZI7 788 aaKnown RBP17.77■□□□□ 0.44
PHGDH-232ENST00000641947 EFHBQ8N7U6 833 aa17.77■□□□□ 0.44
PHGDH-232ENST00000641947 NUDCD1Q96RS6 583 aa17.77■□□□□ 0.44
PHGDH-232ENST00000641947 C2orf49Q9BVC5 232 aaPredicted RBP17.77■□□□□ 0.44
PHGDH-232ENST00000641947 PRO3102Q9H379 93 aa17.77■□□□□ 0.44
PHGDH-232ENST00000641947 PPANQ9NQ55 473 aaKnown RBP17.77■□□□□ 0.44
PHGDH-232ENST00000641947 TBC1D14Q9P2M4 693 aa17.77■□□□□ 0.44
PHGDH-232ENST00000641947 BRWD1Q9NSI6 2320 aa17.77■□□□□ 0.43
PHGDH-232ENST00000641947 MAGEB16A2A368 324 aa17.76■□□□□ 0.43
PHGDH-232ENST00000641947 SHOX2O60902 331 aaPredicted RBP17.76■□□□□ 0.43
PHGDH-232ENST00000641947 ZNF821O75541 412 aaPredicted RBP17.76■□□□□ 0.43
PHGDH-232ENST00000641947 PRLP01236 227 aa17.76■□□□□ 0.43
PHGDH-232ENST00000641947 FCARP24071 287 aa17.76■□□□□ 0.43
PHGDH-232ENST00000641947 ARNTP27540 789 aa17.76■□□□□ 0.43
PHGDH-232ENST00000641947 STK19P49842 368 aaPredicted RBP17.76■□□□□ 0.43
PHGDH-232ENST00000641947 SERPINH1P50454 418 aaKnown RBP17.76■□□□□ 0.43
PHGDH-232ENST00000641947 BMPR2Q13873 1038 aa17.76■□□□□ 0.43
PHGDH-232ENST00000641947 FRG1Q14331 258 aaKnown RBP17.76■□□□□ 0.43
PHGDH-232ENST00000641947 ESRP1Q6NXG1 681 aaKnown RBP17.76■□□□□ 0.43
PHGDH-232ENST00000641947 RASSF3Q86WH2 238 aa17.76■□□□□ 0.43
PHGDH-232ENST00000641947 C4orf33Q8N1A6 199 aa17.76■□□□□ 0.43
PHGDH-232ENST00000641947 SMIM14Q96QK8 99 aa17.76■□□□□ 0.43
PHGDH-232ENST00000641947 TRABDQ9H4I3 376 aa17.76■□□□□ 0.43
PHGDH-232ENST00000641947 SCUBE2Q9NQ36 999 aa17.76■□□□□ 0.43
PHGDH-232ENST00000641947 MARK1Q9P0L2 795 aa17.76■□□□□ 0.43
PHGDH-232ENST00000641947 PRKAG3Q9UGI9 489 aa17.76■□□□□ 0.43
PHGDH-232ENST00000641947 ZNF180Q9UJW8 692 aa17.76■□□□□ 0.43
PHGDH-232ENST00000641947 PRUNE2Q8WUY3 3088 aa17.76■□□□□ 0.43
PHGDH-232ENST00000641947 GOLGA8TH3BQL2 631 aa17.76■□□□□ 0.43
PHGDH-232ENST00000641947 BRAFP15056 766 aa17.76■□□□□ 0.43
PHGDH-232ENST00000641947 CHN1P15882 459 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms