RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 HPSEQ9Y251 543 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 VWA7Q9Y334 891 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 GMPPBQ9Y5P6 360 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 GNSP15586 552 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 CYP2C18P33260 490 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 SLC1A4P43007 532 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 PRIM2P49643 509 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 NT5C2P49902 561 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 CABP4P57796 275 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 RPA4Q13156 261 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 HEATR6Q6AI08 1181 aaKnown RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 RSBN1LQ6PCB5 846 aaPredicted RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 ATG14Q6ZNE5 492 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 THNSL1Q8IYQ7 743 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 SETD7Q8WTS6 366 aaKnown RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 CALML4Q96GE6 196 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 DMRTA2Q96SC8 542 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 C1orf50Q9BV19 199 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 MRPS26Q9BYN8 205 aaKnown RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 HIPK3Q9H422 1215 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 NARFLQ9H6Q4 476 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 PLK2Q9NYY3 685 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 PRKAG3Q9UGI9 489 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 XKRY2A2RUG3 117 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 GRID2IPA4D2P6 1211 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 PPEF2O14830 753 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 CD3EAPO15446 510 aaKnown RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 TOM1O60784 492 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 PSMA5P28066 241 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 SLC5A2P31639 672 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 TRA2BP62995 288 aaKnown RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 XIAPP98170 497 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 DBPQ10586 325 aaPredicted RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 GRIK5Q16478 980 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 KIAA0319Q5VV43 1072 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 POTEAQ6S8J7 498 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 NEK8Q86SG6 692 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 TXNRD3Q86VQ6 643 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 PDIK1LQ8N165 341 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 OR5T2Q8NGG2 359 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 OR4D10Q8NGI6 311 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 OXER1Q8TDS5 423 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 REPS1Q96D71 796 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 BSCL2Q96G97 398 aaPredicted RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 ELMO2Q96JJ3 720 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 SUGCTQ9HAC7 445 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 SUCOQ9UBS9 1254 aaKnown RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 RPH3ALQ9UNE2 315 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 CAMK2AQ9UQM7 478 aa4.35□□□□□ -1.71
SCN3A-209ENST00000639244 SETD1AO15047 1707 aaKnown RBP4.35□□□□□ -1.71
SCN3A-209ENST00000639244 DENND3A2RUS2 1198 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 USP17L13C9JLJ4 530 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 USP17L17D6RBQ6 530 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 ZNF197O14709 1029 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 TLL1O43897 1013 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 TBC1D4O60343 1298 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 TADA2AO75478 443 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 RASAL1O95294 804 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 DLDP09622 509 aaKnown RBP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 PTNP21246 168 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 SERPINB10P48595 397 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 RHDQ02161 417 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 PFKFB4Q16877 469 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 EARS2Q5JPH6 523 aaKnown RBP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 SCARA3Q6AZY7 606 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 RBM44Q6ZP01 1051 aaKnown RBP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 LIMS2Q7Z4I7 341 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 FRMD5Q7Z6J6 570 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 SLC35F3Q8IY50 421 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 PNMA1Q8ND90 353 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 OR7D4Q8NG98 312 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 KLC2Q9H0B6 622 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 SLA2Q9H6Q3 261 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 HMG20AQ9NP66 347 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 CD274Q9NZQ7 290 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 VPS54Q9P1Q0 977 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 COPG2Q9UBF2 871 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 MAGI1Q96QZ7 1491 aaPredicted RBP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 UMODL1Q5DID0 1318 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 PIPSLA2A3N6 862 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 FRS3O43559 492 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 SPDEFO95238 335 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 OTCP00480 354 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 AGTP01019 485 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 ICAM2P13598 275 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 IFNAR1P17181 557 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 MARK3P27448 753 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 AUHQ13825 339 aaKnown RBP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 FAM189A2Q15884 450 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 ESCO2Q56NI9 601 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 TSPYL6Q8N831 410 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 KDM1BQ8NB78 822 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 SLC30A5Q8TAD4 765 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 CCDC134Q9H6E4 229 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 CABP5Q9NP86 173 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 USP20Q9Y2K6 914 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 GPR52Q9Y2T5 361 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 DYSFO75923 2080 aa4.34□□□□□ -1.71
SCN3A-209ENST00000639244 PDE2AO00408 941 aaPredicted RBP4.34□□□□□ -1.71
SCN3A-209ENST00000639244 PQBP1O60828 265 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms