RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 SUSD3Q96L08 255 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 FBXL18Q96ME1 805 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 POMKQ9H5K3 350 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 IL1RAPL1Q9NZN1 696 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-215ENST00000639145 FAF1Q9UNN5 650 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-215ENST00000639145 CCL22O00626 93 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 ATG7O95352 703 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 THRAP10827 490 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 HTR1BP28222 390 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 MAPK1P28482 360 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 L1CAMP32004 1257 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 SULT2A1Q06520 285 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 CNTN1Q12860 1018 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 CBX2Q14781 532 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-215ENST00000639145 RASA2Q15283 850 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 FUKQ8N0W3 1084 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 OR56A4Q8NGH8 313 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 CASP10Q92851 521 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 EMID1Q96A84 441 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-215ENST00000639145 MTFMTQ96DP5 389 aaKnown RBP13.74□□□□□ -0.21
SCARB2-215ENST00000639145 NR1H4Q96RI1 486 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-215ENST00000639145 TSEN34Q9BSV6 310 aaKnown RBP13.74□□□□□ -0.21
SCARB2-215ENST00000639145 ZFP14Q9HCL3 533 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 VPS51Q9UID3 782 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 RPN2P04844 631 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 HOXB8P17481 243 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-215ENST00000639145 MC4RP32245 332 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 CHI3L1P36222 383 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-215ENST00000639145 FAM187BQ17R55 369 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 PARP9Q8IXQ6 854 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 CPA6Q8N4T0 437 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 ACAT2Q9BWD1 397 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 OXCT2Q9BYC2 517 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-215ENST00000639145 STX18Q9P2W9 335 aaKnown RBP13.74□□□□□ -0.21
SCARB2-215ENST00000639145 KLQ9UEF7 1012 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 COL16A1Q07092 1604 aaPredicted RBP13.74□□□□□ -0.21
SCARB2-215ENST00000639145 SLCO1B7G3V0H7 640 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 FGF19O95750 216 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 EIF2S1P05198 315 aaKnown RBP13.74□□□□□ -0.21
SCARB2-215ENST00000639145 TNNI3P19429 210 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 SKIV2L2P42285 1042 aaKnown RBP13.74□□□□□ -0.21
SCARB2-215ENST00000639145 POTEHQ6S545 545 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 ZNF662Q6ZS27 426 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 STAG3L4Q8TBR4 150 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 CXorf40BQ96DE9 158 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 MYO19Q96H55 970 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 DPY30Q9C005 99 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 RAI2Q9Y5P3 530 aa13.74□□□□□ -0.21
SCARB2-215ENST00000639145 TMEM114B3SHH9 223 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 MT-CYBP00156 380 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-215ENST00000639145 KRT16P08779 473 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 NCALDP61601 193 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 TGM3Q08188 693 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 PARP15Q460N3 678 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 AASDHQ4L235 1098 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-215ENST00000639145 AFTPHQ6ULP2 937 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 ZNF280BQ86YH2 543 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 ST13P4Q8IZP2 240 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-215ENST00000639145 KCTD4Q8WVF5 259 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 CNDP1Q96KN2 507 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 SNX8Q9Y5X2 465 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 H3BMM5 538 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 CYP7B1O75881 506 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 ANXA5P08758 320 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 APTXQ7Z2E3 356 aaKnown RBP13.73□□□□□ -0.21
SCARB2-215ENST00000639145 CMC1Q7Z7K0 106 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 PTGR2Q8N8N7 351 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-215ENST00000639145 SH3RF2Q8TEC5 729 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 PSMG2Q969U7 264 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 RHBGQ9H310 441 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 FCF1Q9Y324 198 aaKnown RBP13.73□□□□□ -0.21
SCARB2-215ENST00000639145 DDX3YO15523 660 aaKnown RBP13.73□□□□□ -0.21
SCARB2-215ENST00000639145 HOXD13P35453 343 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 PRKCQQ04759 706 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 PWP1Q13610 501 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 TRIP4Q15650 581 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-215ENST00000639145 CA9Q16790 459 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 CDCA2Q69YH5 1023 aaPredicted RBP13.73□□□□□ -0.21
SCARB2-215ENST00000639145 SERINC5Q86VE9 423 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 POU5F2Q8N7G0 328 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 WDR48Q8TAF3 677 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 ADNPQ9H2P0 1102 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 ZFYVE1Q9HBF4 777 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 VPS45Q9NRW7 570 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 KLC4Q9NSK0 619 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 DNAJB4Q9UDY4 337 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 COL18A1P39060 1754 aa13.73□□□□□ -0.21
SCARB2-215ENST00000639145 IRS2Q9Y4H2 1338 aa13.72□□□□□ -0.21
SCARB2-215ENST00000639145 TCRBV9S1A1TA0A576 114 aa13.72□□□□□ -0.21
SCARB2-215ENST00000639145 LTA4HP09960 611 aaKnown RBP13.72□□□□□ -0.21
SCARB2-215ENST00000639145 EDNRBP24530 442 aa13.72□□□□□ -0.21
SCARB2-215ENST00000639145 SEMG2Q02383 582 aa13.72□□□□□ -0.21
SCARB2-215ENST00000639145 ACSM2AQ08AH3 577 aa13.72□□□□□ -0.21
SCARB2-215ENST00000639145 DMC1Q14565 340 aa13.72□□□□□ -0.21
SCARB2-215ENST00000639145 FBXW10Q5XX13 1052 aa13.72□□□□□ -0.21
SCARB2-215ENST00000639145 ACSM2BQ68CK6 577 aa13.72□□□□□ -0.21
SCARB2-215ENST00000639145 MAMDC4Q6UXC1 1216 aa13.72□□□□□ -0.21
SCARB2-215ENST00000639145 OR4L1Q8NH43 312 aa13.72□□□□□ -0.21
SCARB2-215ENST00000639145 OR14C36Q8NHC7 312 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms