RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 TAB3Q8N5C8 712 aaPredicted RBP14.65□□□□□ -0.06
LINC00339-208ENST00000634934 CNTD1Q8N815 330 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 KDM1BQ8NB78 822 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 GLIS1Q8NBF1 620 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 RTP4Q96DX8 246 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 MYO19Q96H55 970 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 TEKT5Q96M29 485 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 SPATA13Q96N96 652 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 PSKH2Q96QS6 385 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 LRFN3Q9BTN0 628 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 C1QTNF1Q9BXJ1 281 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 FAM129AQ9BZQ8 928 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 CEP44Q9C0F1 390 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 MTG2Q9H4K7 406 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 LMAN1LQ9HAT1 526 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 EPB41L5Q9HCM4 733 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 HAUS2Q9NVX0 235 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 LHX3Q9UBR4 397 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 MTF2Q9Y483 593 aaPredicted RBP14.65□□□□□ -0.06
LINC00339-208ENST00000634934 STON1Q9Y6Q2 735 aa14.65□□□□□ -0.06
LINC00339-208ENST00000634934 A0A087WUV0 522 aaPredicted RBP14.64□□□□□ -0.07
LINC00339-208ENST00000634934 TTC24A2A3L6 582 aaPredicted RBP14.64□□□□□ -0.07
LINC00339-208ENST00000634934 MUSKO15146 869 aa14.64□□□□□ -0.07
LINC00339-208ENST00000634934 TTI1O43156 1089 aa14.64□□□□□ -0.07
LINC00339-208ENST00000634934 OPHN1O60890 802 aa14.64□□□□□ -0.07
LINC00339-208ENST00000634934 KLF8O95600 359 aaPredicted RBP14.64□□□□□ -0.07
LINC00339-208ENST00000634934 KRT14P02533 472 aa14.64□□□□□ -0.07
LINC00339-208ENST00000634934 PRKCHP24723 683 aa14.64□□□□□ -0.07
LINC00339-208ENST00000634934 PTGIRP43119 386 aa14.64□□□□□ -0.07
LINC00339-208ENST00000634934 RECQLP46063 649 aaPredicted RBP14.64□□□□□ -0.07
LINC00339-208ENST00000634934 VPS41P49754 854 aa14.64□□□□□ -0.07
LINC00339-208ENST00000634934 VASPP50552 380 aaPredicted RBP14.64□□□□□ -0.07
LINC00339-208ENST00000634934 DRG2P55039 364 aaKnown RBP14.64□□□□□ -0.07
LINC00339-208ENST00000634934 GUCY2DQ02846 1103 aa14.64□□□□□ -0.07
LINC00339-208ENST00000634934 DHX34Q14147 1143 aaKnown RBP14.64□□□□□ -0.07
LINC00339-208ENST00000634934 LRRC32Q14392 662 aa14.64□□□□□ -0.07
LINC00339-208ENST00000634934 P3H1Q32P28 736 aa14.64□□□□□ -0.07
LINC00339-208ENST00000634934 TTMPQ5BVD1 217 aa14.64□□□□□ -0.07
LINC00339-208ENST00000634934 ITPRIPL1Q6GPH6 555 aa14.64□□□□□ -0.07
LINC00339-208ENST00000634934 SDE2Q6IQ49 451 aa14.64□□□□□ -0.07
LINC00339-208ENST00000634934 KMT2EQ8IZD2 1858 aa14.64□□□□□ -0.07
LINC00339-208ENST00000634934 PCDH20Q8N6Y1 951 aaKnown RBP14.64□□□□□ -0.07
LINC00339-208ENST00000634934 FRS2Q8WU20 508 aa14.64□□□□□ -0.07
LINC00339-208ENST00000634934 ERLEC1Q96DZ1 483 aa14.64□□□□□ -0.07
LINC00339-208ENST00000634934 ATP6V1G3Q96LB4 118 aa14.64□□□□□ -0.07
LINC00339-208ENST00000634934 NELL2Q99435 816 aa14.64□□□□□ -0.07
LINC00339-208ENST00000634934 POLR1EQ9GZS1 481 aaKnown RBP14.64□□□□□ -0.07
LINC00339-208ENST00000634934 MFSD1Q9H3U5 465 aa14.64□□□□□ -0.07
LINC00339-208ENST00000634934 GLOD4Q9HC38 313 aa14.64□□□□□ -0.07
LINC00339-208ENST00000634934 FAM114A2Q9NRY5 505 aa14.64□□□□□ -0.07
LINC00339-208ENST00000634934 RSPH14Q9UHP6 348 aa14.64□□□□□ -0.07
LINC00339-208ENST00000634934 ATP8A1Q9Y2Q0 1164 aa14.64□□□□□ -0.07
LINC00339-208ENST00000634934 PRR33A8MZF0 331 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 EBAG9O00559 213 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 NPC1O15118 1278 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 RAD51CO43502 376 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 PI15O43692 258 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 ZNF821O75541 412 aaPredicted RBP14.63□□□□□ -0.07
LINC00339-208ENST00000634934 IGSF6O95976 241 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 EPHX1P07099 455 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 CHRNB1P11230 501 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 NFKB1P19838 968 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 ECHS1P30084 290 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 NTSR1P30989 418 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 CD68P34810 354 aaPredicted RBP14.63□□□□□ -0.07
LINC00339-208ENST00000634934 RPL22P35268 128 aaKnown RBP14.63□□□□□ -0.07
LINC00339-208ENST00000634934 RGRP47804 291 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 SCNN1BP51168 640 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 SNRPD1P62314 119 aaKnown RBP14.63□□□□□ -0.07
LINC00339-208ENST00000634934 MRPS21P82921 87 aaKnown RBP14.63□□□□□ -0.07
LINC00339-208ENST00000634934 SLC7A5Q01650 507 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 DSC2Q02487 901 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 TRMT11Q7Z4G4 463 aaKnown RBP14.63□□□□□ -0.07
LINC00339-208ENST00000634934 JAMLQ86YT9 394 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 IL17RCQ8NAC3 791 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 OR6K2Q8NGY2 324 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 RPLP0P6Q8NHW5 317 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 KCNV2Q8TDN2 545 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 SLCO2A1Q92959 643 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 ISG20Q96AZ6 181 aaKnown RBP14.63□□□□□ -0.07
LINC00339-208ENST00000634934 GDAP1L1Q96MZ0 367 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 SEMA3CQ99985 751 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 MGME1Q9BQP7 344 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 TMEM245Q9H330 911 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 PCDH9Q9HC56 1237 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 SCUBE2Q9NQ36 999 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 PAK5Q9P286 719 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 SUN2Q9UH99 717 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 NFU1Q9UMS0 254 aa14.63□□□□□ -0.07
LINC00339-208ENST00000634934 ZDBF2Q9HCK1 2354 aa14.62□□□□□ -0.07
LINC00339-208ENST00000634934 EDDM13A0A1B0GTR0 161 aa14.62□□□□□ -0.07
LINC00339-208ENST00000634934 GJB3O75712 270 aa14.62□□□□□ -0.07
LINC00339-208ENST00000634934 HNRNPA1L2Q32P51 320 aaKnown RBP14.62□□□□□ -0.07
LINC00339-208ENST00000634934 CARD16Q5EG05 197 aa14.62□□□□□ -0.07
LINC00339-208ENST00000634934 AGBL2Q5U5Z8 902 aa14.62□□□□□ -0.07
LINC00339-208ENST00000634934 DPY19L3Q6ZPD9 716 aa14.62□□□□□ -0.07
LINC00339-208ENST00000634934 Q6ZS52 159 aa14.62□□□□□ -0.07
LINC00339-208ENST00000634934 SYDE1Q6ZW31 735 aaPredicted RBP14.62□□□□□ -0.07
LINC00339-208ENST00000634934 ZNF687Q8N1G0 1237 aa14.62□□□□□ -0.07
LINC00339-208ENST00000634934 TXNDC5Q8NBS9 432 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms