RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 NSMCE1Q8WV22 266 aa16.97■□□□□ 0.31
UBE3D-208ENST00000626828 CALR3Q96L12 384 aaKnown RBP16.97■□□□□ 0.31
UBE3D-208ENST00000626828 BAG1Q99933 345 aaPredicted RBP16.97■□□□□ 0.31
UBE3D-208ENST00000626828 CINPQ9BW66 212 aaPredicted RBP16.97■□□□□ 0.31
UBE3D-208ENST00000626828 FSCN3Q9NQT6 498 aa16.97■□□□□ 0.31
UBE3D-208ENST00000626828 DKK3Q9UBP4 350 aa16.97■□□□□ 0.31
UBE3D-208ENST00000626828 SEPT3Q9UH03 358 aa16.97■□□□□ 0.31
UBE3D-208ENST00000626828 ALG6Q9Y672 507 aa16.97■□□□□ 0.31
UBE3D-208ENST00000626828 A0A1B0GVT2 93 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 SOWAHDA6NJG2 315 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 GOLGA6L6A8MZA4 724 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 VILLO15195 856 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 AP1G1O43747 822 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 MAFKO60675 156 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 OPHN1O60890 802 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 CD38P28907 300 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 PPP2CBP62714 309 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 PPP2CAP67775 309 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 GRIK2Q13002 908 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 LBRQ14739 615 aaKnown RBP16.96■□□□□ 0.31
UBE3D-208ENST00000626828 SETMARQ53H47 684 aaPredicted RBP16.96■□□□□ 0.31
UBE3D-208ENST00000626828 ODF2Q5BJF6 829 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 SLC45A4Q5BKX6 768 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 ERMP1Q7Z2K6 904 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 ADAT2Q7Z6V5 191 aaKnown RBP16.96■□□□□ 0.31
UBE3D-208ENST00000626828 ZSCAN30Q86W11 494 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 HORMAD1Q86X24 394 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 VSIG1Q86XK7 387 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 BBS5Q8N3I7 341 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 MINDY1Q8N5J2 469 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 SPC24Q8NBT2 197 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 TSEN2Q8NCE0 465 aaKnown RBP16.96■□□□□ 0.31
UBE3D-208ENST00000626828 RAPGEF5Q92565 580 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 VOPP1Q96AW1 172 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 FAF2Q96CS3 445 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 SERAC1Q96JX3 654 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 ZNF641Q96N77 438 aaPredicted RBP16.96■□□□□ 0.31
UBE3D-208ENST00000626828 RNF157Q96PX1 679 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 PSKH2Q96QS6 385 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 MAK16Q9BXY0 300 aaKnown RBP16.96■□□□□ 0.31
UBE3D-208ENST00000626828 SUV39H2Q9H5I1 410 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 AASDHPPTQ9NRN7 309 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 DNAAF2Q9NVR5 837 aaKnown RBP16.96■□□□□ 0.31
UBE3D-208ENST00000626828 DDX56Q9NY93 547 aaKnown RBP16.96■□□□□ 0.31
UBE3D-208ENST00000626828 ANKRD6Q9Y2G4 727 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 FADS3Q9Y5Q0 445 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 SLCO1B1Q9Y6L6 691 aa16.96■□□□□ 0.31
UBE3D-208ENST00000626828 SHROOM3Q8TF72 1996 aa16.95■□□□□ 0.3
UBE3D-208ENST00000626828 LAMA1P25391 3075 aa16.95■□□□□ 0.3
UBE3D-208ENST00000626828 A0A1W2PQU0 124 aa16.95■□□□□ 0.3
UBE3D-208ENST00000626828 ZNF487B1APH4 448 aa16.95■□□□□ 0.3
UBE3D-208ENST00000626828 PRAMEF26H0Y7S4 382 aa16.95■□□□□ 0.3
UBE3D-208ENST00000626828 INSIG1O15503 277 aa16.95■□□□□ 0.3
UBE3D-208ENST00000626828 TSPAN6O43657 245 aa16.95■□□□□ 0.3
UBE3D-208ENST00000626828 SPOPO43791 374 aa16.95■□□□□ 0.3
UBE3D-208ENST00000626828 COMTP21964 271 aa16.95■□□□□ 0.3
UBE3D-208ENST00000626828 MAT2AP31153 395 aaKnown RBP16.95■□□□□ 0.3
UBE3D-208ENST00000626828 HSPA9P38646 679 aaKnown RBP16.95■□□□□ 0.3
UBE3D-208ENST00000626828 SUOXP51687 545 aa16.95■□□□□ 0.3
UBE3D-208ENST00000626828 C21orf59P57076 290 aa16.95■□□□□ 0.3
UBE3D-208ENST00000626828 RPS21P63220 83 aaKnown RBP16.95■□□□□ 0.3
UBE3D-208ENST00000626828 SLC10A7Q0GE19 358 aa16.95■□□□□ 0.3
UBE3D-208ENST00000626828 SLC14A1Q13336 389 aa16.95■□□□□ 0.3
UBE3D-208ENST00000626828 STAT4Q14765 748 aa16.95■□□□□ 0.3
UBE3D-208ENST00000626828 NAPEPLDQ6IQ20 393 aa16.95■□□□□ 0.3
UBE3D-208ENST00000626828 PARS2Q7L3T8 475 aaKnown RBP16.95■□□□□ 0.3
UBE3D-208ENST00000626828 ATPAF2Q8N5M1 289 aa16.95■□□□□ 0.3
UBE3D-208ENST00000626828 TUBGCP5Q96RT8 1024 aa16.95■□□□□ 0.3
UBE3D-208ENST00000626828 PCDH15Q96QU1 1955 aa16.95■□□□□ 0.3
UBE3D-208ENST00000626828 LRRD1A4D1F6 860 aa16.94■□□□□ 0.3
UBE3D-208ENST00000626828 UPK3BL1B0FP48 263 aa16.94■□□□□ 0.3
UBE3D-208ENST00000626828 UPK3BL2E5RIL1 263 aa16.94■□□□□ 0.3
UBE3D-208ENST00000626828 NEMP1O14524 444 aa16.94■□□□□ 0.3
UBE3D-208ENST00000626828 DFNA5O60443 496 aa16.94■□□□□ 0.3
UBE3D-208ENST00000626828 BUB1BO60566 1050 aaPredicted RBP16.94■□□□□ 0.3
UBE3D-208ENST00000626828 CER1O95813 267 aa16.94■□□□□ 0.3
UBE3D-208ENST00000626828 TIMP2P16035 220 aa16.94■□□□□ 0.3
UBE3D-208ENST00000626828 MX2P20592 715 aa16.94■□□□□ 0.3
UBE3D-208ENST00000626828 SCNN1BP51168 640 aa16.94■□□□□ 0.3
UBE3D-208ENST00000626828 BNC1Q01954 994 aa16.94■□□□□ 0.3
UBE3D-208ENST00000626828 KIF19Q2TAC6 998 aa16.94■□□□□ 0.3
UBE3D-208ENST00000626828 HLA-BQ31612 363 aa16.94■□□□□ 0.3
UBE3D-208ENST00000626828 MARC1Q5VT66 337 aa16.94■□□□□ 0.3
UBE3D-208ENST00000626828 NCBP2-AS2Q69YL0 99 aa16.94■□□□□ 0.3
UBE3D-208ENST00000626828 KIAA1161Q6NSJ0 714 aa16.94■□□□□ 0.3
UBE3D-208ENST00000626828 RAD9BQ6WBX8 426 aa16.94■□□□□ 0.3
UBE3D-208ENST00000626828 PQLC3Q8N755 202 aa16.94■□□□□ 0.3
UBE3D-208ENST00000626828 MFSD2AQ8NA29 543 aa16.94■□□□□ 0.3
UBE3D-208ENST00000626828 EXOC2Q96KP1 924 aa16.94■□□□□ 0.3
UBE3D-208ENST00000626828 SLC6A18Q96N87 628 aa16.94■□□□□ 0.3
UBE3D-208ENST00000626828 SLC17A9Q9BYT1 436 aa16.94■□□□□ 0.3
UBE3D-208ENST00000626828 GAREM1Q9H706 876 aa16.94■□□□□ 0.3
UBE3D-208ENST00000626828 ATP13A3Q9H7F0 1226 aa16.94■□□□□ 0.3
UBE3D-208ENST00000626828 KLHL11Q9NVR0 708 aa16.94■□□□□ 0.3
UBE3D-208ENST00000626828 A0A1W2PR77 199 aa16.93■□□□□ 0.3
UBE3D-208ENST00000626828 SLC31A1O15431 190 aa16.93■□□□□ 0.3
UBE3D-208ENST00000626828 MAGEC1O60732 1142 aa16.93■□□□□ 0.3
UBE3D-208ENST00000626828 PEX11BO96011 259 aa16.93■□□□□ 0.3
UBE3D-208ENST00000626828 TNNT1P13805 278 aa16.93■□□□□ 0.3
UBE3D-208ENST00000626828 ZFXP17010 805 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms