RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 ZNF814B7Z6K7 855 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 LIASO43766 372 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 ATG13O75143 517 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 TIPRLO75663 272 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 CCNDBP1O95273 360 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 CELA2AP08217 269 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 CHRNB1P11230 501 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 PTPN2P17706 415 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 ARL3P36405 182 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 RARSP54136 660 aaKnown RBP4.32□□□□□ -1.72
CDR1-202ENST00000625883 NAP1L1P55209 391 aaKnown RBP4.32□□□□□ -1.72
CDR1-202ENST00000625883 OLR1P78380 273 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 MAMLD1Q13495 774 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 MED22Q15528 200 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 ALG11Q2TAA5 492 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 C6orf10Q5SRN2 563 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 HMBOX1Q6NT76 420 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 TMEM71Q6P5X7 295 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 SLC2A7Q6PXP3 512 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 CYP20A1Q6UW02 462 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 C16orf54Q6UWD8 224 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 DHX40Q8IX18 779 aaKnown RBP4.32□□□□□ -1.72
CDR1-202ENST00000625883 FAM185AQ8N0U4 392 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 TMEM116Q8NCL8 245 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 SLC44A5Q8NCS7 719 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 RASSF8Q8NHQ8 419 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 SDF4Q9BRK5 362 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 NUF2Q9BZD4 464 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 SEPT11Q9NVA2 429 aaKnown RBP4.32□□□□□ -1.72
CDR1-202ENST00000625883 SEL1LQ9UBV2 794 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 TBC1D29Q9UFV1 150 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 LIMA1Q9UHB6 759 aaKnown RBP4.32□□□□□ -1.72
CDR1-202ENST00000625883 GPR34Q9UPC5 381 aa4.32□□□□□ -1.72
CDR1-202ENST00000625883 RUSC2Q8N2Y8 1516 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 C17orf102A2RUQ5 167 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 HSPB2A8KAH6 182 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 NPIPB11E5RHQ5 1161 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 HSPB6O14558 160 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 KIF1CO43896 1103 aaKnown RBP4.31□□□□□ -1.72
CDR1-202ENST00000625883 PAGE4O60829 102 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 CLDN7O95471 211 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 CYP19A1P11511 503 aaPredicted RBP4.31□□□□□ -1.72
CDR1-202ENST00000625883 ZNF8P17098 575 aaPredicted RBP4.31□□□□□ -1.72
CDR1-202ENST00000625883 HOXD13P35453 343 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 CXCR3P49682 368 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 HDAC4P56524 1084 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 TMPRSS3P57727 454 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 NANOS3P60323 173 aaKnown RBP4.31□□□□□ -1.72
CDR1-202ENST00000625883 CEBPZQ03701 1054 aaKnown RBP4.31□□□□□ -1.72
CDR1-202ENST00000625883 PDE1CQ14123 709 aaPredicted RBP4.31□□□□□ -1.72
CDR1-202ENST00000625883 HSPB2Q16082 182 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 GSTA3Q16772 222 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 Q4G0T1 1027 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 ZKSCAN2Q63HK3 967 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 IKBIPQ70UQ0 350 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 TMC8Q8IU68 726 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 ZDHHC23Q8IYP9 409 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 KIAA2013Q8IYS2 634 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 HORMAD2Q8N7B1 307 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 MCPH1Q8NEM0 835 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 PABPC5Q96DU9 382 aaKnown RBP4.31□□□□□ -1.72
CDR1-202ENST00000625883 RSRC1Q96IZ7 334 aaKnown RBP4.31□□□□□ -1.72
CDR1-202ENST00000625883 TIGD1Q96MW7 591 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 STRA6Q9BX79 667 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 B3GNT4Q9C0J1 378 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 PLEKHA4Q9H4M7 779 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 MVB12BQ9H7P6 319 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 MAP6D1Q9H9H5 199 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 EIF2B3Q9NR50 452 aaKnown RBP4.31□□□□□ -1.72
CDR1-202ENST00000625883 CORO1CQ9ULV4 474 aaPredicted RBP4.31□□□□□ -1.72
CDR1-202ENST00000625883 ADAM18Q9Y3Q7 739 aa4.31□□□□□ -1.72
CDR1-202ENST00000625883 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.31□□□□□ -1.72
CDR1-202ENST00000625883 A0A096LPK6 155 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 LIPT2A6NK58 231 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 K7ENM7 598 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 TFP02787 698 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 PRR35P0CG20 571 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 SRD5A1P18405 259 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 NFKBIAP25963 317 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 PTGER1P34995 402 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 HADHAP40939 763 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 GPR12P47775 334 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 CLNS1AP54105 237 aaKnown RBP4.3□□□□□ -1.72
CDR1-202ENST00000625883 GAD2Q05329 585 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 GRIK3Q13003 919 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 MTX1Q13505 466 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 VEPH1Q14D04 833 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 TOMM20Q15388 145 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 CCNG2Q16589 344 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 C10orf25Q5T742 122 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 LRRC8EQ6NSJ5 796 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 TTI2Q6NXR4 508 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 NCEH1Q6PIU2 408 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 BRINP3Q76B58 766 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 PIP4P1Q86T03 277 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 TBC1D26Q86UD7 250 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 ANKRD13BQ86YJ7 626 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 TDRPQ86YL5 185 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 FAM217AQ8IXS0 508 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 PSPC1Q8WXF1 523 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms