RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 RBM38Q9H0Z9 239 aaKnown RBP13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 SIRPGQ9P1W8 387 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 ZNHIT2Q9UHR6 403 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 NOCTQ9UK39 431 aaKnown RBP13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 ACOT9Q9Y305 439 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 MRPL11Q9Y3B7 192 aaKnown RBP13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 C7orf72A4D263 438 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 WTIPA6NIX2 430 aaPredicted RBP13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 AP1G1O43747 822 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 TADA2AO75478 443 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 B3GALNT1O75752 331 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 FKBP9O95302 570 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 YWHAZP63104 245 aaKnown RBP13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 TRAP1Q12931 704 aaKnown RBP13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 FRG1Q14331 258 aaKnown RBP13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 FXNQ16595 210 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 IGDCC3Q8IVU1 814 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 NATD1Q8N6N6 113 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 SMG8Q8ND04 991 aaKnown RBP13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 ITFG1Q8TB96 612 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 ZFP90Q8TF47 636 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 ZBTB18Q99592 522 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 EBNA1BP2Q99848 306 aaKnown RBP13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 NPLQ9BXD5 320 aaPredicted RBP13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 SNX15Q9NRS6 342 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 SFMBT1Q9UHJ3 866 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 ADGRA2Q96PE1 1338 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 MTA2O94776 668 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 TCF4P15884 667 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 HADHAP40939 763 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 PFKPQ01813 784 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 TNK2Q07912 1038 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 PPIL2Q13356 520 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 ZNF667Q5HYK9 610 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 CDC26Q8NHZ8 85 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 RXFP2Q8WXD0 754 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 NKD2Q969F2 451 aaPredicted RBP13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 SH3YL1Q96HL8 342 aaPredicted RBP13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 C8orf37Q96NL8 207 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 GATA5Q9BWX5 397 aaPredicted RBP13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 EXD2Q9NVH0 621 aa13.68□□□□□ -0.22
PPP4R3B-205ENST00000616288 TMEM2Q9UHN6 1383 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 SOCS2O14508 198 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 CHADO15335 359 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 NCK1P16333 377 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 CSHL1Q14406 222 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 TRIM48Q8IWZ4 208 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 OR6P1Q8NGX9 317 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 ZBTB14O43829 449 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 GTF2A2P52657 109 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 BNC1Q01954 994 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 IL18R1Q13478 541 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 SEMA3AQ14563 771 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 QPRTQ15274 297 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 DCP2Q8IU60 420 aaKnown RBP13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 ATG16L2Q8NAA4 619 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 MRPL39Q9NYK5 338 aaKnown RBP13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 RAPGEFL1Q9UHV5 662 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 HSPB11Q9Y547 144 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 PPME1Q9Y570 386 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 H0YCG3 227 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 B4GAT1O43505 415 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 TIMM44O43615 452 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 TOP3AQ13472 1001 aaPredicted RBP13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 SYT16Q17RD7 645 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 HMBOX1Q6NT76 420 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 BBS12Q6ZW61 710 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 ACDQ96AP0 544 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 GFM1Q96RP9 751 aaKnown RBP13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 ZC3H12CQ9C0D7 883 aaKnown RBP13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 FETUBQ9UGM5 382 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 RNF11Q9Y3C5 154 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 MTF2Q9Y483 593 aaPredicted RBP13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 SNX9Q9Y5X1 595 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 PEAK1Q9H792 1746 aa13.67□□□□□ -0.22
PPP4R3B-205ENST00000616288 PABPN1LA6NDY0 278 aaKnown RBP13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 PLOD2O00469 737 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 ADRB2P07550 413 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 THRBP10828 461 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 GRK3P35626 688 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 CPOXP36551 454 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 SLC27A3Q5K4L6 730 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 GALNT7Q86SF2 657 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 RELL1Q8IUW5 271 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 UNC5BQ8IZJ1 945 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 LILRA2Q8N149 483 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 CNTD1Q8N815 330 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 OR5H6Q8NGV6 325 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 UBA3Q8TBC4 463 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 ACMSDQ8TDX5 336 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 PHOX2BQ99453 314 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 CD320Q9NPF0 282 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 DIABLOQ9NR28 239 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 CDH9Q9ULB4 789 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 MRC1P22897 1456 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 LOC102724428A0A0B4J2F2 783 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 PSKH1P11801 424 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 MIPP30301 263 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 UQCRC1P31930 480 aa13.66□□□□□ -0.22
PPP4R3B-205ENST00000616288 YWHABP31946 246 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms