RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 SCNN1BP51168 640 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 SNX17Q15036 470 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 TMTC4Q5T4D3 741 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 TIGD7Q6NT04 549 aaPredicted RBP6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 PKN3Q6P5Z2 889 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 PTGR2Q8N8N7 351 aaPredicted RBP6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 DCBLD1Q8N8Z6 715 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 PPTC7Q8NI37 304 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 GPR152Q8TDT2 470 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 ACTRT2Q8TDY3 377 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 NAT14Q8WUY8 206 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 LPGAT1Q92604 370 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 MYLPFQ96A32 169 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 DGCR14Q96DF8 476 aaKnown RBP6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 SNX27Q96L92 541 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 FCRL3Q96P31 734 aaPredicted RBP6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 TINF2Q9BSI4 451 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 LATS2Q9NRM7 1088 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 STK39Q9UEW8 545 aa6.94□□□□□ -1.3
SYNPO2-206ENST00000610556 SMIM31A0A1B0GVY4 71 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 A6NHS1 94 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 FAM72CH0Y354 149 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 DPYSL4O14531 572 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 NRP1O14786 923 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 KATNA1O75449 491 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 PARNO95453 639 aaKnown RBP6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 LTA4HP09960 611 aaKnown RBP6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 ITGB6P18564 788 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 IL4RP24394 825 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 FASP25445 335 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 CXCR3P49682 368 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 PSEN2P49810 448 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 RENBPP51606 427 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 ZIK1Q3SY52 487 aaPredicted RBP6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 NOMO2Q5JPE7 1267 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 FAM72AQ5TYM5 149 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 FAM72DQ6L9T8 149 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 ZNF280DQ6N043 979 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 FAM72BQ86X60 149 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 PNPLA1Q8N8W4 532 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 FAM47BQ8NA70 645 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 PCED1BQ96HM7 432 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 ZFRQ96KR1 1074 aaKnown RBP6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 ZNF512Q96ME7 567 aaPredicted RBP6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 RNF145Q96MT1 663 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 ZNF778Q96MU6 729 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 PHF12Q96QT6 1004 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 MRPL57Q9BQC6 102 aaKnown RBP6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 SLC39A3Q9BRY0 314 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 DHRS4Q9BTZ2 278 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 SPATA16Q9BXB7 569 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 BRD8Q9H0E9 1235 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 ENTPD7Q9NQZ7 604 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 ZDHHC2Q9UIJ5 367 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 ADAMTS6Q9UKP5 1117 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 NRCAMQ92823 1304 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 DNAJA2O60884 412 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 IRF1P10914 325 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 TKTP29401 623 aaKnown RBP6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 SERPINH1P50454 418 aaKnown RBP6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 ARHGAP1Q07960 439 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 INCA1Q0VD86 236 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 FRG1Q14331 258 aaKnown RBP6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 CTC1Q2NKJ3 1217 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 KCTD21Q4G0X4 260 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 METTL21CQ5VZV1 264 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 CUZD1Q86UP6 607 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 HERC6Q8IVU3 1022 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 MAGEE2Q8TD90 523 aaPredicted RBP6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 TMEM174Q8WUU8 243 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 LRTOMTQ8WZ04 291 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 DLG3Q92796 817 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 PARK7Q99497 189 aaKnown RBP6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 C17orf80Q9BSJ5 609 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 KATNAL1Q9BW62 490 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 PAIP1Q9H074 479 aaKnown RBP6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 GBA3Q9H227 469 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 SPAG4Q9NPE6 437 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 TBC1D13Q9NVG8 400 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 LRFN2Q9ULH4 789 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 OR4Q2P0C623 313 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 LINC00032P0C843 101 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 CKMT2P17540 419 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 HDCP19113 662 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 FMO4P31512 558 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 CPT1AP50416 773 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 PRKAA2P54646 552 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 GRIK3Q13003 919 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 C9orf131Q5VYM1 1079 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 ARHGAP17Q68EM7 881 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 GLB1LQ6UWU2 654 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 CXCL17Q6UXB2 119 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 ZYG11AQ6WRX3 759 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 SLC22A9Q8IVM8 553 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 MIER2Q8N344 545 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 HEXDCQ8WVB3 486 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 FBXO32Q969P5 355 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 EXOC2Q96KP1 924 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 GLOD4Q9HC38 313 aa6.93□□□□□ -1.3
SYNPO2-206ENST00000610556 CNGB3Q9NQW8 809 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms