RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 C2orf54Q08AI8 447 aa12.8□□□□□ -0.36
CHMP2A-206ENST00000600118 PARP6Q2NL67 630 aa12.8□□□□□ -0.36
CHMP2A-206ENST00000600118 RYBPQ8N488 228 aaPredicted RBP12.8□□□□□ -0.36
CHMP2A-206ENST00000600118 CCDC89Q8N998 374 aa12.8□□□□□ -0.36
CHMP2A-206ENST00000600118 MNS1Q8NEH6 495 aa12.8□□□□□ -0.36
CHMP2A-206ENST00000600118 GRK7Q8WTQ7 553 aa12.8□□□□□ -0.36
CHMP2A-206ENST00000600118 SPOCK2Q92563 424 aa12.8□□□□□ -0.36
CHMP2A-206ENST00000600118 OXNAD1Q96HP4 312 aaPredicted RBP12.8□□□□□ -0.36
CHMP2A-206ENST00000600118 MRGPRX1Q96LB2 322 aa12.8□□□□□ -0.36
CHMP2A-206ENST00000600118 KRT12Q99456 494 aa12.8□□□□□ -0.36
CHMP2A-206ENST00000600118 SCUBE2Q9NQ36 999 aa12.8□□□□□ -0.36
CHMP2A-206ENST00000600118 PAK5Q9P286 719 aa12.8□□□□□ -0.36
CHMP2A-206ENST00000600118 IL36AQ9UHA7 158 aa12.8□□□□□ -0.36
CHMP2A-206ENST00000600118 RSPH14Q9UHP6 348 aa12.8□□□□□ -0.36
CHMP2A-206ENST00000600118 SARDHQ9UL12 918 aa12.8□□□□□ -0.36
CHMP2A-206ENST00000600118 FARP1Q9Y4F1 1045 aaPredicted RBP12.8□□□□□ -0.36
CHMP2A-206ENST00000600118 TTLL3Q9Y4R7 772 aa12.8□□□□□ -0.36
CHMP2A-206ENST00000600118 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 TSPAN11A1L157 253 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 K7ESF4 209 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 TRAFD1O14545 582 aaPredicted RBP12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 HTRA2O43464 458 aaPredicted RBP12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 SOCS5O75159 536 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 LEFTY1O75610 366 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 GAS8O95995 478 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 PRNPP04156 253 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 GABRG2P18507 467 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 PSMB4P28070 264 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 CD86P42081 329 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 CXCL12P48061 93 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 RPS14P62263 151 aaKnown RBP12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 DR1Q01658 176 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 RAD51Q06609 339 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 DHX34Q14147 1143 aaKnown RBP12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 GRM3Q14832 879 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 KCTD19Q17RG1 926 aaPredicted RBP12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 ARSIQ5FYB1 569 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 DNTTIP2Q5QJE6 756 aaKnown RBP12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 ZNF776Q68DI1 518 aaPredicted RBP12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 KDELC1Q6UW63 502 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 ARHGEF18Q6ZSZ5 1173 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 SYDE1Q6ZW31 735 aaPredicted RBP12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 GSTA5Q7RTV2 222 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 DSG4Q86SJ6 1040 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 RASSF3Q86WH2 238 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 TMPRSS6Q8IU80 811 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 CAMK1DQ8IU85 385 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 MMAAQ8IVH4 418 aaKnown RBP12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 MMGT1Q8N4V1 131 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 CEP112Q8N8E3 955 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 SPATA22Q8NHS9 363 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 ECHDC3Q96DC8 303 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 ERLEC1Q96DZ1 483 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 ZNF641Q96N77 438 aaPredicted RBP12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 MLPHQ9BV36 600 aaPredicted RBP12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 OSBPL1AQ9BXW6 950 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 ZDHHC6Q9H6R6 413 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 POLMQ9NP87 494 aaPredicted RBP12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 PRMT8Q9NR22 394 aaPredicted RBP12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 VPS45Q9NRW7 570 aa12.79□□□□□ -0.36
CHMP2A-206ENST00000600118 CKAP5Q14008 2032 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 TCRBV21S2A2A0A5A6 115 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 CTAGE15A4D2H0 777 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 FZD6O60353 706 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 GPR37L1O60883 481 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 PIGNO95427 931 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 APBB3O95704 486 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 MT-CYBP00156 380 aaPredicted RBP12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 KRT14P02533 472 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 SERPINF2P08697 491 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 CTAGE8P0CG41 777 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 TDGF1P13385 188 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 NDUFV2P19404 249 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 HOXA6P31267 233 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 CCR3P51677 355 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 METAP1P53582 386 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 ZBTB16Q05516 673 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 BCL2L1Q07817 233 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 TRAF2Q12933 501 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 SEMA5AQ13591 1074 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 PTK6Q13882 451 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 CST6Q15828 149 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 ZNF805Q5CZA5 627 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 KCTD11Q693B1 232 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 C4orf22Q6V702 233 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 GDPD4Q6W3E5 623 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 CTAGE6Q86UF2 777 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 JAMLQ86YT9 394 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 CTAGE4Q8IX94 777 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 CAMKK1Q8N5S9 505 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 DTWD2Q8NBA8 298 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 TSTD1Q8NFU3 115 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 PIP4K2CQ8TBX8 421 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 GRIN3AQ8TCU5 1115 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 HCAR2Q8TDS4 363 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 FAM131CQ96AQ9 280 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 PPP1R2P1Q96PQ5 205 aa12.78□□□□□ -0.36
CHMP2A-206ENST00000600118 HHIPQ96QV1 700 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms