RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 PCDHGA5Q9Y5G8 931 aa19.13■□□□□ 0.65
CCDC9-205ENST00000600117 EML5Q05BV3 1969 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 CCDC163A0A0D9SF12 145 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 H7C0C1 242 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 MCF2LO15068 1137 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 RPP40O75818 363 aaKnown RBP19.12■□□□□ 0.65
CCDC9-205ENST00000600117 GSRP00390 522 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 C7P10643 843 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 CCNB1P14635 433 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 RGRP47804 291 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 ATP5OP48047 213 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 DGKEP52429 567 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 COPAP53621 1224 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 RHOAP61586 193 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 ZBTB17Q13105 803 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 STARD3Q14849 445 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 LONRF2Q1L5Z9 754 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 CARD16Q5EG05 197 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 MARC1Q5VT66 337 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 PSAPL1Q6NUJ1 521 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 PGBD5Q8N414 524 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 MAIP1Q8WWC4 291 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 PSKH2Q96QS6 385 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 FAM129BQ96TA1 746 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 IL12RB2Q99665 862 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 TM6SF2Q9BZW4 377 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 C10orf88Q9H8K7 445 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 SAR1BQ9Y6B6 198 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 LAMA5O15230 3695 aa19.12■□□□□ 0.65
CCDC9-205ENST00000600117 BCLAF3A2AJT9 711 aaKnown RBP19.11■□□□□ 0.65
CCDC9-205ENST00000600117 PGRMC1O00264 195 aaKnown RBP19.11■□□□□ 0.65
CCDC9-205ENST00000600117 SYNCRIPO60506 623 aaKnown RBP19.11■□□□□ 0.65
CCDC9-205ENST00000600117 RBL1P28749 1068 aa19.11■□□□□ 0.65
CCDC9-205ENST00000600117 MMP13P45452 471 aa19.11■□□□□ 0.65
CCDC9-205ENST00000600117 RENBPP51606 427 aa19.11■□□□□ 0.65
CCDC9-205ENST00000600117 WASHC5Q12768 1159 aa19.11■□□□□ 0.65
CCDC9-205ENST00000600117 FAM182AQ5T1J6 154 aa19.11■□□□□ 0.65
CCDC9-205ENST00000600117 ATXN7L2Q5T6C5 722 aaPredicted RBP19.11■□□□□ 0.65
CCDC9-205ENST00000600117 DPY19L3Q6ZPD9 716 aa19.11■□□□□ 0.65
CCDC9-205ENST00000600117 KBTBD6Q86V97 674 aa19.11■□□□□ 0.65
CCDC9-205ENST00000600117 CREG2Q8IUH2 290 aa19.11■□□□□ 0.65
CCDC9-205ENST00000600117 CDKL3Q8IVW4 592 aaPredicted RBP19.11■□□□□ 0.65
CCDC9-205ENST00000600117 STK40Q8N2I9 435 aa19.11■□□□□ 0.65
CCDC9-205ENST00000600117 CNTD1Q8N815 330 aa19.11■□□□□ 0.65
CCDC9-205ENST00000600117 CHST14Q8NCH0 376 aa19.11■□□□□ 0.65
CCDC9-205ENST00000600117 OR2AP1Q8NGE2 309 aa19.11■□□□□ 0.65
CCDC9-205ENST00000600117 OR2T3Q8NH03 318 aa19.11■□□□□ 0.65
CCDC9-205ENST00000600117 NSMCE1Q8WV22 266 aa19.11■□□□□ 0.65
CCDC9-205ENST00000600117 C1orf54Q8WWF1 131 aa19.11■□□□□ 0.65
CCDC9-205ENST00000600117 HHIPQ96QV1 700 aa19.11■□□□□ 0.65
CCDC9-205ENST00000600117 MGME1Q9BQP7 344 aa19.11■□□□□ 0.65
CCDC9-205ENST00000600117 CINPQ9BW66 212 aaPredicted RBP19.11■□□□□ 0.65
CCDC9-205ENST00000600117 FRMD8P1Q9BZ68 369 aaPredicted RBP19.11■□□□□ 0.65
CCDC9-205ENST00000600117 DNPEPQ9ULA0 475 aa19.11■□□□□ 0.65
CCDC9-205ENST00000600117 FREM2Q5SZK8 3169 aa19.1■□□□□ 0.65
CCDC9-205ENST00000600117 TCRBV21S2A2A0A5A6 115 aa19.1■□□□□ 0.65
CCDC9-205ENST00000600117 ALOX15BO15296 676 aa19.1■□□□□ 0.65
CCDC9-205ENST00000600117 LIASO43766 372 aa19.1■□□□□ 0.65
CCDC9-205ENST00000600117 BNIP3LO60238 219 aa19.1■□□□□ 0.65
CCDC9-205ENST00000600117 JCHAINP01591 159 aa19.1■□□□□ 0.65
CCDC9-205ENST00000600117 HLA-DQB2P05538 268 aa19.1■□□□□ 0.65
CCDC9-205ENST00000600117 GABRG2P18507 467 aa19.1■□□□□ 0.65
CCDC9-205ENST00000600117 CR2P20023 1033 aa19.1■□□□□ 0.65
CCDC9-205ENST00000600117 PTPN3P26045 913 aa19.1■□□□□ 0.65
CCDC9-205ENST00000600117 HSPA9P38646 679 aaKnown RBP19.1■□□□□ 0.65
CCDC9-205ENST00000600117 CCNHP51946 323 aaPredicted RBP19.1■□□□□ 0.65
CCDC9-205ENST00000600117 SNRPD1P62314 119 aaKnown RBP19.1■□□□□ 0.65
CCDC9-205ENST00000600117 ELAVL3Q14576 367 aaKnown RBP19.1■□□□□ 0.65
CCDC9-205ENST00000600117 ZNF235Q14590 738 aa19.1■□□□□ 0.65
CCDC9-205ENST00000600117 OASLQ15646 514 aaKnown RBP19.1■□□□□ 0.65
CCDC9-205ENST00000600117 PRELID2Q8N945 189 aa19.1■□□□□ 0.65
CCDC9-205ENST00000600117 TSTD1Q8NFU3 115 aa19.1■□□□□ 0.65
CCDC9-205ENST00000600117 HTR3CQ8WXA8 447 aa19.1■□□□□ 0.65
CCDC9-205ENST00000600117 EXOC2Q96KP1 924 aa19.1■□□□□ 0.65
CCDC9-205ENST00000600117 GDAP1L1Q96MZ0 367 aa19.1■□□□□ 0.65
CCDC9-205ENST00000600117 MKRN2Q9H000 416 aaKnown RBP19.1■□□□□ 0.65
CCDC9-205ENST00000600117 RSPH9Q9H1X1 276 aaPredicted RBP19.1■□□□□ 0.65
CCDC9-205ENST00000600117 FBRSQ9HAH7 460 aa19.1■□□□□ 0.65
CCDC9-205ENST00000600117 USP29Q9HBJ7 922 aa19.1■□□□□ 0.65
CCDC9-205ENST00000600117 POLMQ9NP87 494 aaPredicted RBP19.1■□□□□ 0.65
CCDC9-205ENST00000600117 NT5MQ9NPB1 228 aa19.1■□□□□ 0.65
CCDC9-205ENST00000600117 VPS45Q9NRW7 570 aa19.1■□□□□ 0.65
CCDC9-205ENST00000600117 RBM22Q9NW64 420 aaKnown RBP eCLIP19.1■□□□□ 0.65
CCDC9-205ENST00000600117 KIF2AO00139 706 aaPredicted RBP19.09■□□□□ 0.65
CCDC9-205ENST00000600117 MTSS1O43312 755 aa19.09■□□□□ 0.65
CCDC9-205ENST00000600117 TUBB4AP04350 444 aa19.09■□□□□ 0.65
CCDC9-205ENST00000600117 CTSLP07711 333 aa19.09■□□□□ 0.65
CCDC9-205ENST00000600117 MPLP40238 635 aa19.09■□□□□ 0.65
CCDC9-205ENST00000600117 CSNK1DP48730 415 aa19.09■□□□□ 0.65
CCDC9-205ENST00000600117 NSUN2Q08J23 767 aaKnown RBP eCLIP19.09■□□□□ 0.65
CCDC9-205ENST00000600117 CCNG2Q16589 344 aa19.09■□□□□ 0.65
CCDC9-205ENST00000600117 ALG1LQ6GMV1 187 aa19.09■□□□□ 0.65
CCDC9-205ENST00000600117 DARS2Q6PI48 645 aaKnown RBP19.09■□□□□ 0.65
CCDC9-205ENST00000600117 RASSF3Q86WH2 238 aa19.09■□□□□ 0.65
CCDC9-205ENST00000600117 BBS5Q8N3I7 341 aa19.09■□□□□ 0.65
CCDC9-205ENST00000600117 OR6K2Q8NGY2 324 aa19.09■□□□□ 0.65
CCDC9-205ENST00000600117 OR8D1Q8WZ84 308 aa19.09■□□□□ 0.65
CCDC9-205ENST00000600117 ZC3H10Q96K80 434 aaKnown RBP19.09■□□□□ 0.65
CCDC9-205ENST00000600117 MRGPRX1Q96LB2 322 aa19.09■□□□□ 0.65
CCDC9-205ENST00000600117 CCDC114Q96M63 670 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms