RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 INSIG1O15503 277 aa16.76■□□□□ 0.27
SHKBP1-219ENST00000599575 FGGP02679 453 aa16.76■□□□□ 0.27
SHKBP1-219ENST00000599575 ATP1A1P05023 1023 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-219ENST00000599575 CTSLP07711 333 aa16.76■□□□□ 0.27
SHKBP1-219ENST00000599575 NFKBIAP25963 317 aa16.76■□□□□ 0.27
SHKBP1-219ENST00000599575 SCNN1BP51168 640 aa16.76■□□□□ 0.27
SHKBP1-219ENST00000599575 BCL2L1Q07817 233 aa16.76■□□□□ 0.27
SHKBP1-219ENST00000599575 DMWDQ09019 674 aa16.76■□□□□ 0.27
SHKBP1-219ENST00000599575 CCNG2Q16589 344 aa16.76■□□□□ 0.27
SHKBP1-219ENST00000599575 ATXN7L2Q5T6C5 722 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-219ENST00000599575 NEK5Q6P3R8 708 aa16.76■□□□□ 0.27
SHKBP1-219ENST00000599575 ACTRT1Q8TDG2 376 aa16.76■□□□□ 0.27
SHKBP1-219ENST00000599575 NKD2Q969F2 451 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-219ENST00000599575 ZC3H10Q96K80 434 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-219ENST00000599575 TEKT5Q96M29 485 aa16.76■□□□□ 0.27
SHKBP1-219ENST00000599575 OSBPL9Q96SU4 736 aa16.76■□□□□ 0.27
SHKBP1-219ENST00000599575 SUV39H2Q9H5I1 410 aa16.76■□□□□ 0.27
SHKBP1-219ENST00000599575 NT5MQ9NPB1 228 aa16.76■□□□□ 0.27
SHKBP1-219ENST00000599575 SCUBE2Q9NQ36 999 aa16.76■□□□□ 0.27
SHKBP1-219ENST00000599575 WSB2Q9NYS7 404 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-219ENST00000599575 RNF14Q9UBS8 474 aa16.76■□□□□ 0.27
SHKBP1-219ENST00000599575 EVLQ9UI08 416 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-219ENST00000599575 SARDHQ9UL12 918 aa16.76■□□□□ 0.27
SHKBP1-219ENST00000599575 MUC6Q6W4X9 2439 aa16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 IGHV1OR15-9A0A0B4J2B8 117 aa16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 TSPAN11A1L157 253 aa16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 KIF2AO00139 706 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 MUSKO15146 869 aa16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 RNASEH2AO75792 299 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 SERPINF2P08697 491 aa16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 NBL1P41271 181 aa16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 DPP6P42658 865 aa16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 NEK3P51956 506 aa16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 ELF2Q15723 593 aa16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 LONRF2Q1L5Z9 754 aa16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 DARS2Q6PI48 645 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 NCEH1Q6PIU2 408 aa16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 ERN2Q76MJ5 926 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 PGBD5Q8N414 524 aa16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 HDDC3Q8N4P3 179 aa16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 AADATQ8N5Z0 425 aa16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 GRIN3AQ8TCU5 1115 aa16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 GANCQ8TET4 914 aa16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 ATOH1Q92858 354 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 FOXJ1Q92949 421 aa16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 EXOC2Q96KP1 924 aa16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 SLC25A51Q9H1U9 297 aa16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 SLC6A17Q9H1V8 727 aa16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 EPC1Q9H2F5 836 aa16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 SAR1BQ9Y6B6 198 aa16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 NUP205Q92621 2012 aa16.75■□□□□ 0.27
SHKBP1-219ENST00000599575 WDFY4Q6ZS81 3184 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 LRRC72A6NJI9 287 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 PGRMC1O00264 195 aaKnown RBP16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 MAP3K13O43283 966 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 HRO43593 1189 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 AP1G1O43747 822 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 NDUFS2O75306 463 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 RHOBTB1O94844 696 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 UGT2B4P06133 528 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 PTPN3P26045 913 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 CXCR5P32302 372 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 DRD3P35462 400 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 NUDT1P36639 197 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 RGRP47804 291 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 RPL26P61254 145 aaKnown RBP16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 ITKQ08881 620 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 WASHC5Q12768 1159 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 CFAP58Q5T655 872 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 ITPRIPL1Q6GPH6 555 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 FBXL19Q6PCT2 694 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 CEP68Q76N32 757 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 CNTD1Q8N815 330 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 VOPP1Q96AW1 172 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 ECHDC3Q96DC8 303 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 TOE1Q96GM8 510 aaKnown RBP16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 LOXL4Q96JB6 756 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 WDR24Q96S15 920 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 SEMA3CQ99985 751 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 DUSP15Q9H1R2 295 aaPredicted RBP16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 NOD2Q9HC29 1040 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 VPS45Q9NRW7 570 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 CYP8B1Q9UNU6 501 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 RPL26L1Q9UNX3 145 aaKnown RBP16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 DRG1Q9Y295 367 aaKnown RBP16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 ATG2BQ96BY7 2078 aa16.74■□□□□ 0.27
SHKBP1-219ENST00000599575 NYNRINQ9P2P1 1898 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 A0A1W2PP55 124 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 C5orf60A6NFR6 353 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 C16orf96A6NNT2 1141 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 RNF103O00237 685 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 HTRA2O43464 458 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 PLRG1O43660 514 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 LIASO43766 372 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 OPHN1O60890 802 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 HLA-DQB2P05538 268 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 ITGAVP06756 1048 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 RBL1P28749 1068 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 LMNB2Q03252 620 aa16.73■□□□□ 0.27
SHKBP1-219ENST00000599575 CNTN1Q12860 1018 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms