RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 SLC6A3Q01959 620 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 FAM183BPQ6ZVS7 135 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 KIAA0907Q7Z7F0 614 aaPredicted RBP14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 C14orf80Q86SX3 495 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 REXO1L1PQ8IX06 675 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 C3orf20Q8ND61 904 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 KIAA1524Q8TCG1 905 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 CLEC4CQ8WTT0 213 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 IRGQQ8WZA9 623 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 KLK6Q92876 244 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 ZNF653Q96CK0 615 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 TRIM44Q96DX7 344 aaPredicted RBP14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 MRGPRX3Q96LB0 322 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 ULBP1Q9BZM6 244 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 KLHL11Q9NVR0 708 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 GEMIN8Q9NWZ8 242 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 STIM2Q9P246 746 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 CNOT8Q9UFF9 292 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 TPX2Q9ULW0 747 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 DMTF1Q9Y222 760 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 ZKSCAN5Q9Y2L8 839 aa14.21□□□□□ -0.13
SHKBP1-218ENST00000598907 A0A0A6YYK5 440 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 SIGLEC16A6NMB1 481 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 PRAMEF26H0Y7S4 382 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 AGRPO00253 132 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 NOBOXO60393 691 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 TBL1XO60907 577 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 MTA2O94776 668 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 ZBED1O96006 694 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 ARHGAP25P42331 645 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 CTSOP43234 321 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 HARS2P49590 506 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 NUMBP49757 651 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 HADHBP55084 474 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 MAMLD1Q13495 774 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 SETMARQ53H47 684 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 MANEAQ5SRI9 462 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 OR6B2Q6IFH4 312 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 SLC26A9Q7LBE3 791 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 ARCQ7LC44 396 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 SIX6OS1Q8N1H7 587 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 TXLNBQ8N3L3 684 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 HTR3CQ8WXA8 447 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 CTNNBL1Q8WYA6 563 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 LIN37Q96GY3 246 aaPredicted RBP14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 SYNCQ9H7C4 482 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 USP29Q9HBJ7 922 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 EPB41L5Q9HCM4 733 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 FZD3Q9NPG1 666 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 PARVAQ9NVD7 372 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 ASNSD1Q9NWL6 643 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 DNAJC28Q9NX36 388 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 TMEM59LQ9UK28 342 aa14.2□□□□□ -0.14
SHKBP1-218ENST00000598907 DOCK9Q9BZ29 2069 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 ICE1Q9Y2F5 2266 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 EDDM13A0A1B0GTR0 161 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 SLC31A1O15431 190 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 ATMINO43313 823 aaPredicted RBP14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 GLI1P08151 1106 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 MZF1P28698 734 aaPredicted RBP14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 DRD3P35462 400 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 MLLT3P42568 568 aaPredicted RBP14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 PDX1P52945 283 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 YWHAGP61981 247 aaKnown RBP eCLIP14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 EFHC1Q5JVL4 640 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 PERM1Q5SV97 790 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 RFWD3Q6PCD5 774 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 BEND5Q7L4P6 421 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 PHLDB2Q86SQ0 1253 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 KIAA1328Q86T90 577 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 MFN1Q8IWA4 741 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 RHOT2Q8IXI1 618 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 ZNF276Q8N554 614 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 ZSCAN1Q8NBB4 408 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 OR13H1Q8NG92 308 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 NDRG1Q92597 394 aaKnown RBP14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 GRAMD1AQ96CP6 724 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 FAM129BQ96TA1 746 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 UVRAGQ9P2Y5 699 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 SALL4Q9UJQ4 1053 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 PLAAQ9Y263 795 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 SCINQ9Y6U3 715 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 DUSP10Q9Y6W6 482 aa14.19□□□□□ -0.14
SHKBP1-218ENST00000598907 NEMP2A6NFY4 417 aa14.18□□□□□ -0.14
SHKBP1-218ENST00000598907 TMEM191CA6NGB0 347 aa14.18□□□□□ -0.14
SHKBP1-218ENST00000598907 YJEFN3A6XGL0 299 aa14.18□□□□□ -0.14
SHKBP1-218ENST00000598907 E7ENQ6 273 aa14.18□□□□□ -0.14
SHKBP1-218ENST00000598907 SCAMP1O15126 338 aa14.18□□□□□ -0.14
SHKBP1-218ENST00000598907 MUSKO15146 869 aa14.18□□□□□ -0.14
SHKBP1-218ENST00000598907 SART1O43290 800 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-218ENST00000598907 ZSCAN12O43309 604 aa14.18□□□□□ -0.14
SHKBP1-218ENST00000598907 MSI1O43347 362 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-218ENST00000598907 ASLP04424 464 aa14.18□□□□□ -0.14
SHKBP1-218ENST00000598907 FYNP06241 537 aa14.18□□□□□ -0.14
SHKBP1-218ENST00000598907 LIPCP11150 499 aa14.18□□□□□ -0.14
SHKBP1-218ENST00000598907 HGFP14210 728 aa14.18□□□□□ -0.14
SHKBP1-218ENST00000598907 WT1P19544 449 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-218ENST00000598907 KIF5AQ12840 1032 aa14.18□□□□□ -0.14
SHKBP1-218ENST00000598907 TAF5Q15542 800 aa14.18□□□□□ -0.14
SHKBP1-218ENST00000598907 TRIP4Q15650 581 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms