RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 MYLK3Q32MK0 819 aa13.97□□□□□ -0.17
SCAF1-203ENST00000598359 TMEM259Q4ZIN3 620 aa13.97□□□□□ -0.17
SCAF1-203ENST00000598359 NEK5Q6P3R8 708 aa13.97□□□□□ -0.17
SCAF1-203ENST00000598359 GCNT7Q6ZNI0 430 aa13.97□□□□□ -0.17
SCAF1-203ENST00000598359 CYP4V2Q6ZWL3 525 aaPredicted RBP13.97□□□□□ -0.17
SCAF1-203ENST00000598359 OR13H1Q8NG92 308 aa13.97□□□□□ -0.17
SCAF1-203ENST00000598359 OR2AP1Q8NGE2 309 aa13.97□□□□□ -0.17
SCAF1-203ENST00000598359 KLHDC7BQ96G42 594 aa13.97□□□□□ -0.17
SCAF1-203ENST00000598359 KLHL32Q96NJ5 620 aa13.97□□□□□ -0.17
SCAF1-203ENST00000598359 KCTD15Q96SI1 283 aaPredicted RBP13.97□□□□□ -0.17
SCAF1-203ENST00000598359 SNRNP25Q9BV90 132 aaKnown RBP13.97□□□□□ -0.17
SCAF1-203ENST00000598359 CALN1Q9BXU9 219 aa13.97□□□□□ -0.17
SCAF1-203ENST00000598359 RETREG1Q9H6L5 497 aa13.97□□□□□ -0.17
SCAF1-203ENST00000598359 IGSF10Q6WRI0 2623 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 FAM149AA5PLN7 773 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 FAM221BA6H8Z2 402 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 IGLON5A6NGN9 336 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 WASH4PA8MWX3 477 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 J3KR12 359 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 EEF2KO00418 725 aaKnown RBP13.96□□□□□ -0.17
SCAF1-203ENST00000598359 SPINT1O43278 529 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 PAK4O96013 591 aaPredicted RBP13.96□□□□□ -0.17
SCAF1-203ENST00000598359 HNRNPA2B1P22626 353 aaKnown RBP13.96□□□□□ -0.17
SCAF1-203ENST00000598359 MIPP30301 263 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 NUDT1P36639 197 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 PBX1P40424 430 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 ARRB1P49407 418 aaPredicted RBP13.96□□□□□ -0.17
SCAF1-203ENST00000598359 UBASH3AP57075 661 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 GEMIN4P57678 1058 aaKnown RBP13.96□□□□□ -0.17
SCAF1-203ENST00000598359 RHOAP61586 193 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 SNRPD1P62314 119 aaKnown RBP13.96□□□□□ -0.17
SCAF1-203ENST00000598359 CCDC15Q0P6D6 951 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 CYTH1Q15438 398 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 TDRD12Q587J7 1177 aaKnown RBP13.96□□□□□ -0.17
SCAF1-203ENST00000598359 HGSNATQ68CP4 663 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 KANSL1Q7Z3B3 1105 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 IQCHQ86VS3 1027 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 UMODL1-AS1Q8N2C9 162 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 CNDP2Q96KP4 475 aaKnown RBP13.96□□□□□ -0.17
SCAF1-203ENST00000598359 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.96□□□□□ -0.17
SCAF1-203ENST00000598359 SLC17A9Q9BYT1 436 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 EDEM3Q9BZQ6 932 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 KCNF1Q9H3M0 494 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 CATSPERBQ9H7T0 1116 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 ERVMER34-1Q9H9K5 563 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 IMPACTQ9P2X3 320 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 LHX3Q9UBR4 397 aa13.96□□□□□ -0.17
SCAF1-203ENST00000598359 ASH1LQ9NR48 2969 aaKnown RBP13.96□□□□□ -0.17
SCAF1-203ENST00000598359 POM121BA6NF01 834 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 NEMP1O14524 444 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 ENC1O14682 589 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 FGF10O15520 208 aaPredicted RBP13.95□□□□□ -0.18
SCAF1-203ENST00000598359 CBFA2T2O43439 604 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 LRCH4O75427 683 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 DKK1O94907 266 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 PIGNO95427 931 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 POP4O95707 220 aaKnown RBP13.95□□□□□ -0.18
SCAF1-203ENST00000598359 LDOC1O95751 146 aaPredicted RBP13.95□□□□□ -0.18
SCAF1-203ENST00000598359 GZMAP12544 262 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 TCF4P15884 667 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 DESP17661 470 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 RXRGP48443 463 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 AIF1P55008 147 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 YBEYP58557 167 aaPredicted RBP13.95□□□□□ -0.18
SCAF1-203ENST00000598359 INAVAQ3KP66 663 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 PARP15Q460N3 678 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 ZNF805Q5CZA5 627 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 ZNF542PQ5EBM4 170 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 PPP6R3Q5H9R7 873 aaPredicted RBP13.95□□□□□ -0.18
SCAF1-203ENST00000598359 FIGNQ5HY92 759 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 ERMARDQ5T6L9 678 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 PPP1R2P3Q6NXS1 205 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 DHRS13Q6UX07 377 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 GDPD4Q6W3E5 623 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 CCNI2Q6ZMN8 369 aaPredicted RBP13.95□□□□□ -0.18
SCAF1-203ENST00000598359 PTAR1Q7Z6K3 402 aaPredicted RBP13.95□□□□□ -0.18
SCAF1-203ENST00000598359 TP53INP2Q8IXH6 220 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 PLPP6Q8IY26 295 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 SLC22A18ASQ8N1D0 253 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 SPC24Q8NBT2 197 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 FEM1CQ96JP0 617 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 BTBD6Q96KE9 485 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 BMFQ96LC9 184 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 GDAP1L1Q96MZ0 367 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 SLC39A8Q9C0K1 460 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 LRRC19Q9H756 370 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 UCKL1Q9NWZ5 548 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 IFNKQ9P0W0 207 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 MFHAS1Q9Y4C4 1052 aa13.95□□□□□ -0.18
SCAF1-203ENST00000598359 HELZ2Q9BYK8 2649 aaKnown RBP13.94□□□□□ -0.18
SCAF1-203ENST00000598359 BPTFQ12830 3046 aa13.94□□□□□ -0.18
SCAF1-203ENST00000598359 CXorf51AA0A1B0GTR3 108 aa13.94□□□□□ -0.18
SCAF1-203ENST00000598359 ZSCAN5CA6NGD5 496 aaPredicted RBP13.94□□□□□ -0.18
SCAF1-203ENST00000598359 YKT6O15498 198 aa13.94□□□□□ -0.18
SCAF1-203ENST00000598359 DAPK3O43293 454 aa13.94□□□□□ -0.18
SCAF1-203ENST00000598359 AP1G1O43747 822 aa13.94□□□□□ -0.18
SCAF1-203ENST00000598359 PRPSAP2O60256 369 aa13.94□□□□□ -0.18
SCAF1-203ENST00000598359 RNF8O76064 485 aa13.94□□□□□ -0.18
SCAF1-203ENST00000598359 IGSF6O95976 241 aa13.94□□□□□ -0.18
SCAF1-203ENST00000598359 IL1R2P27930 398 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms