RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 NOP2P46087 812 aaKnown RBP16.95■□□□□ 0.3
SSBP4-204ENST00000597724 CSNK1DP48730 415 aa16.95■□□□□ 0.3
SSBP4-204ENST00000597724 SLC10A7Q0GE19 358 aa16.95■□□□□ 0.3
SSBP4-204ENST00000597724 PAFAH1B3Q15102 231 aaKnown RBP16.95■□□□□ 0.3
SSBP4-204ENST00000597724 TEAD4Q15561 434 aa16.95■□□□□ 0.3
SSBP4-204ENST00000597724 NCBP2-AS2Q69YL0 99 aa16.95■□□□□ 0.3
SSBP4-204ENST00000597724 RAD9BQ6WBX8 426 aa16.95■□□□□ 0.3
SSBP4-204ENST00000597724 DGLUCYQ7Z3D6 616 aa16.95■□□□□ 0.3
SSBP4-204ENST00000597724 LRRC49Q8IUZ0 686 aa16.95■□□□□ 0.3
SSBP4-204ENST00000597724 SPC24Q8NBT2 197 aa16.95■□□□□ 0.3
SSBP4-204ENST00000597724 SLC6A18Q96N87 628 aa16.95■□□□□ 0.3
SSBP4-204ENST00000597724 BAG1Q99933 345 aaPredicted RBP16.95■□□□□ 0.3
SSBP4-204ENST00000597724 DMTF1Q9Y222 760 aa16.95■□□□□ 0.3
SSBP4-204ENST00000597724 ANKRD6Q9Y2G4 727 aa16.95■□□□□ 0.3
SSBP4-204ENST00000597724 FADS3Q9Y5Q0 445 aa16.95■□□□□ 0.3
SSBP4-204ENST00000597724 CNOT1A5YKK6 2376 aaKnown RBP16.95■□□□□ 0.3
SSBP4-204ENST00000597724 DOCK9Q9BZ29 2069 aa16.95■□□□□ 0.3
SSBP4-204ENST00000597724 ASCC3Q8N3C0 2202 aaKnown RBP16.94■□□□□ 0.3
SSBP4-204ENST00000597724 A0A1W2PQU0 124 aa16.94■□□□□ 0.3
SSBP4-204ENST00000597724 RCCD1A6NED2 376 aa16.94■□□□□ 0.3
SSBP4-204ENST00000597724 WNT9AO14904 365 aa16.94■□□□□ 0.3
SSBP4-204ENST00000597724 BUB1BO60566 1050 aaPredicted RBP16.94■□□□□ 0.3
SSBP4-204ENST00000597724 GJB3O75712 270 aa16.94■□□□□ 0.3
SSBP4-204ENST00000597724 PCDH8O95206 1070 aa16.94■□□□□ 0.3
SSBP4-204ENST00000597724 COMTP21964 271 aa16.94■□□□□ 0.3
SSBP4-204ENST00000597724 RGRP47804 291 aa16.94■□□□□ 0.3
SSBP4-204ENST00000597724 NSUN2Q08J23 767 aaKnown RBP eCLIP16.94■□□□□ 0.3
SSBP4-204ENST00000597724 LBRQ14739 615 aaKnown RBP16.94■□□□□ 0.3
SSBP4-204ENST00000597724 GRM3Q14832 879 aa16.94■□□□□ 0.3
SSBP4-204ENST00000597724 UAP1L1Q3KQV9 507 aa16.94■□□□□ 0.3
SSBP4-204ENST00000597724 ZFYVE27Q5T4F4 411 aa16.94■□□□□ 0.3
SSBP4-204ENST00000597724 TMCO4Q5TGY1 634 aa16.94■□□□□ 0.3
SSBP4-204ENST00000597724 SRLQ86TD4 932 aa16.94■□□□□ 0.3
SSBP4-204ENST00000597724 HORMAD1Q86X24 394 aa16.94■□□□□ 0.3
SSBP4-204ENST00000597724 TMEM139Q8IV31 216 aa16.94■□□□□ 0.3
SSBP4-204ENST00000597724 RHOT1Q8IXI2 618 aa16.94■□□□□ 0.3
SSBP4-204ENST00000597724 PQLC3Q8N755 202 aa16.94■□□□□ 0.3
SSBP4-204ENST00000597724 RAB7BQ96AH8 199 aa16.94■□□□□ 0.3
SSBP4-204ENST00000597724 SERAC1Q96JX3 654 aa16.94■□□□□ 0.3
SSBP4-204ENST00000597724 RNF157Q96PX1 679 aa16.94■□□□□ 0.3
SSBP4-204ENST00000597724 PSKH2Q96QS6 385 aa16.94■□□□□ 0.3
SSBP4-204ENST00000597724 CINPQ9BW66 212 aaPredicted RBP16.94■□□□□ 0.3
SSBP4-204ENST00000597724 DNAAF2Q9NVR5 837 aaKnown RBP16.94■□□□□ 0.3
SSBP4-204ENST00000597724 DKK3Q9UBP4 350 aa16.94■□□□□ 0.3
SSBP4-204ENST00000597724 SEPT3Q9UH03 358 aa16.94■□□□□ 0.3
SSBP4-204ENST00000597724 REXO2Q9Y3B8 237 aaKnown RBP16.94■□□□□ 0.3
SSBP4-204ENST00000597724 HYOU1Q9Y4L1 999 aa16.94■□□□□ 0.3
SSBP4-204ENST00000597724 ALG6Q9Y672 507 aa16.94■□□□□ 0.3
SSBP4-204ENST00000597724 LRRD1A4D1F6 860 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 C3orf70A6NLC5 250 aaPredicted RBP16.93■□□□□ 0.3
SSBP4-204ENST00000597724 ZNF487B1APH4 448 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 MUSKO15146 869 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 VILLO15195 856 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 SPOPO43791 374 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 MFSD11O43934 449 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 OPHN1O60890 802 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 IPO7O95373 1038 aaKnown RBP16.93■□□□□ 0.3
SSBP4-204ENST00000597724 WNT1P04628 370 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 CD38P28907 300 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 ABL2P42684 1182 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 RENBPP51606 427 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 KIF19Q2TAC6 998 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 ZNF284Q2VY69 593 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 HLA-BQ31612 363 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 TMEM259Q4ZIN3 620 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 SETMARQ53H47 684 aaPredicted RBP16.93■□□□□ 0.3
SSBP4-204ENST00000597724 NAPEPLDQ6IQ20 393 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 IL27RAQ6UWB1 636 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 LAYNQ6UX15 382 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 ERMP1Q7Z2K6 904 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 ADAT2Q7Z6V5 191 aaKnown RBP16.93■□□□□ 0.3
SSBP4-204ENST00000597724 VSIG1Q86XK7 387 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 ATPAF2Q8N5M1 289 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 HCAR2Q8TDS4 363 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 FEM1CQ96JP0 617 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 AASDHPPTQ9NRN7 309 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 DDX56Q9NY93 547 aaKnown RBP16.93■□□□□ 0.3
SSBP4-204ENST00000597724 SALL4Q9UJQ4 1053 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 ZFR2Q9UPR6 939 aaKnown RBP16.93■□□□□ 0.3
SSBP4-204ENST00000597724 SNX11Q9Y5W9 270 aa16.93■□□□□ 0.3
SSBP4-204ENST00000597724 A0A1W2PR77 199 aa16.92■□□□□ 0.3
SSBP4-204ENST00000597724 AREL1O15033 823 aa16.92■□□□□ 0.3
SSBP4-204ENST00000597724 SPINT1O43278 529 aa16.92■□□□□ 0.3
SSBP4-204ENST00000597724 PIGNO95427 931 aa16.92■□□□□ 0.3
SSBP4-204ENST00000597724 RPS21P63220 83 aaKnown RBP16.92■□□□□ 0.3
SSBP4-204ENST00000597724 GALNT2Q10471 571 aa16.92■□□□□ 0.3
SSBP4-204ENST00000597724 SEL1L3Q68CR1 1132 aa16.92■□□□□ 0.3
SSBP4-204ENST00000597724 KIAA1161Q6NSJ0 714 aa16.92■□□□□ 0.3
SSBP4-204ENST00000597724 TTC7BQ86TV6 843 aa16.92■□□□□ 0.3
SSBP4-204ENST00000597724 KLK6Q92876 244 aa16.92■□□□□ 0.3
SSBP4-204ENST00000597724 ZNF641Q96N77 438 aaPredicted RBP16.92■□□□□ 0.3
SSBP4-204ENST00000597724 TUBGCP5Q96RT8 1024 aa16.92■□□□□ 0.3
SSBP4-204ENST00000597724 GOLPH3Q9H4A6 298 aa16.92■□□□□ 0.3
SSBP4-204ENST00000597724 SUV39H2Q9H5I1 410 aa16.92■□□□□ 0.3
SSBP4-204ENST00000597724 GAREM1Q9H706 876 aa16.92■□□□□ 0.3
SSBP4-204ENST00000597724 TRPM6Q9BX84 2022 aa16.92■□□□□ 0.3
SSBP4-204ENST00000597724 SPTBN2O15020 2390 aa16.92■□□□□ 0.3
SSBP4-204ENST00000597724 BTNL10A8MVZ5 291 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 UPK3BL1B0FP48 263 aa16.91■□□□□ 0.3
SSBP4-204ENST00000597724 UPK3BL2E5RIL1 263 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms