RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 TREX1Q9NSU2 369 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 OR12D3Q9UGF7 316 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 IPO11Q9UI26 975 aaKnown RBP12.52□□□□□ -0.41
PDE4A-207ENST00000590407 TCAF1Q9Y4C2 921 aa12.52□□□□□ -0.41
PDE4A-207ENST00000590407 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.51□□□□□ -0.41
PDE4A-207ENST00000590407 TCRBV3S1A0A5B6 114 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 FAM155AB1AL88 458 aaPredicted RBP12.51□□□□□ -0.41
PDE4A-207ENST00000590407 HHLA1C9JL84 531 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 RNASEH2AO75792 299 aaKnown RBP12.51□□□□□ -0.41
PDE4A-207ENST00000590407 F2P00734 622 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 JUNP05412 331 aaKnown RBP12.51□□□□□ -0.41
PDE4A-207ENST00000590407 ETS2P15036 469 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 SMPD1P17405 629 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 TPH1P17752 444 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 ARNTP27540 789 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 HOXC13P31276 330 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 CCR10P46092 362 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 CD151P48509 253 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 MAP3K7CLP57077 242 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 ADAM17P78536 824 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 CDKL1Q00532 357 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 PFKPQ01813 784 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 LRP8Q14114 963 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 TTLL12Q14166 644 aaPredicted RBP12.51□□□□□ -0.41
PDE4A-207ENST00000590407 PPP2R5DQ14738 602 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 SNX17Q15036 470 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 MGAT5BQ3V5L5 792 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.51□□□□□ -0.41
PDE4A-207ENST00000590407 LRRC23Q53EV4 343 aaPredicted RBP12.51□□□□□ -0.41
PDE4A-207ENST00000590407 FAM45BPQ6NSW5 357 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 C8orf82Q6P1X6 216 aaPredicted RBP12.51□□□□□ -0.41
PDE4A-207ENST00000590407 KLHDC10Q6PID8 442 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 TRIM67Q6ZTA4 783 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 MFSD6LQ8IWD5 586 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 LZTR1Q8N653 840 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 TXNDC5Q8NBS9 432 aaKnown RBP12.51□□□□□ -0.41
PDE4A-207ENST00000590407 ZMIZ2Q8NF64 920 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 OR6J1Q8NGC5 347 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 B4GALNT2Q8NHY0 566 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 FAM45AQ8TCE6 357 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 TRPC4APQ8TEL6 797 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 LZICQ8WZA0 190 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 LENG1Q96BZ8 264 aaPredicted RBP12.51□□□□□ -0.41
PDE4A-207ENST00000590407 NXNL1Q96CM4 212 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 MPP4Q96JB8 637 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 MAML3Q96JK9 1138 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 PPP1R10Q96QC0 940 aaKnown RBP12.51□□□□□ -0.41
PDE4A-207ENST00000590407 APOL2Q9BQE5 337 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 TRMOQ9BU70 441 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 SENP6Q9GZR1 1112 aaPredicted RBP12.51□□□□□ -0.41
PDE4A-207ENST00000590407 WDCPQ9H6R7 721 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 EML4Q9HC35 981 aaKnown RBP12.51□□□□□ -0.41
PDE4A-207ENST00000590407 GLOD4Q9HC38 313 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 CRTAC1Q9NQ79 661 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 NEU3Q9UQ49 428 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 PIN4Q9Y237 131 aaKnown RBP12.51□□□□□ -0.41
PDE4A-207ENST00000590407 SQORQ9Y6N5 450 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 A0A1B0GVG6 124 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 CFLARO15519 480 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 SMIM10L2AP0DMW4 78 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 SMIM10L2BP0DMW5 78 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 NCAM1P13591 858 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 PSMC3P17980 439 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 SLC7A1P30825 629 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 ACADVLP49748 655 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 SULT2A1Q06520 285 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 MYLK3Q32MK0 819 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 TECRLQ5HYJ1 363 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 KIAA0319Q5VV43 1072 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 CARM1Q86X55 608 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 LRRC49Q8IUZ0 686 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 CEP97Q8IW35 865 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 SMG8Q8ND04 991 aaKnown RBP12.51□□□□□ -0.41
PDE4A-207ENST00000590407 GABPB2Q8TAK5 448 aaPredicted RBP12.51□□□□□ -0.41
PDE4A-207ENST00000590407 FAM81AQ8TBF8 368 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 SPPL2BQ8TCT7 592 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 USP13Q92995 863 aaPredicted RBP12.51□□□□□ -0.41
PDE4A-207ENST00000590407 NMD3Q96D46 503 aaKnown RBP12.51□□□□□ -0.41
PDE4A-207ENST00000590407 RNF39Q9H2S5 420 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 CSNK1G1Q9HCP0 422 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 IGSF5Q9NSI5 407 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 CACNA2D2Q9NY47 1150 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 KLK14Q9P0G3 267 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 CD300AQ9UGN4 299 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 CIDEBQ9UHD4 219 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 PACSIN3Q9UKS6 424 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 SLC45A1Q9Y2W3 748 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 IPPQ9Y573 584 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 AP4S1Q9Y587 144 aa12.51□□□□□ -0.41
PDE4A-207ENST00000590407 HEATR9A2RTY3 570 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 PTGESO14684 152 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 ZBTB7AO95365 584 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 IGLV3-25P01717 112 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 ZNF23P17027 643 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 SLC26A3P40879 764 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 GLRBP48167 497 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 ALDH3B2P48448 385 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 CLCN5P51795 746 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 TAS2R39P59534 338 aa12.5□□□□□ -0.41
PDE4A-207ENST00000590407 TUBA4AP68366 448 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms