RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 FAM46CQ5VWP2 391 aa20.44■□□□□ 0.86
ATG4D-208ENST00000588667 SLC36A4Q6YBV0 504 aa20.44■□□□□ 0.86
ATG4D-208ENST00000588667 USP30Q70CQ3 517 aa20.44■□□□□ 0.86
ATG4D-208ENST00000588667 IFT20Q8IY31 132 aa20.44■□□□□ 0.86
ATG4D-208ENST00000588667 FRMD1Q8N878 549 aa20.44■□□□□ 0.86
ATG4D-208ENST00000588667 ZC3H10Q96K80 434 aaKnown RBP20.44■□□□□ 0.86
ATG4D-208ENST00000588667 GDAP1L1Q96MZ0 367 aa20.44■□□□□ 0.86
ATG4D-208ENST00000588667 FRMD8P1Q9BZ68 369 aaPredicted RBP20.44■□□□□ 0.86
ATG4D-208ENST00000588667 MBD1Q9UIS9 605 aaPredicted RBP20.44■□□□□ 0.86
ATG4D-208ENST00000588667 RAB23Q9ULC3 237 aa20.44■□□□□ 0.86
ATG4D-208ENST00000588667 PIEZO1Q92508 2521 aa20.44■□□□□ 0.86
ATG4D-208ENST00000588667 ZFHX2Q9C0A1 2572 aaPredicted RBP20.44■□□□□ 0.86
ATG4D-208ENST00000588667 EP300Q09472 2414 aaPredicted RBP20.43■□□□□ 0.86
ATG4D-208ENST00000588667 C1QTNF3-AMACRE9PGA6 284 aa20.43■□□□□ 0.86
ATG4D-208ENST00000588667 CST8O60676 142 aa20.43■□□□□ 0.86
ATG4D-208ENST00000588667 ERLIN1O75477 346 aa20.43■□□□□ 0.86
ATG4D-208ENST00000588667 PRNPP04156 253 aa20.43■□□□□ 0.86
ATG4D-208ENST00000588667 MX2P20592 715 aa20.43■□□□□ 0.86
ATG4D-208ENST00000588667 CD6P30203 668 aa20.43■□□□□ 0.86
ATG4D-208ENST00000588667 OXTRP30559 389 aa20.43■□□□□ 0.86
ATG4D-208ENST00000588667 SLC8A1P32418 973 aa20.43■□□□□ 0.86
ATG4D-208ENST00000588667 ADCY2Q08462 1091 aa20.43■□□□□ 0.86
ATG4D-208ENST00000588667 CYTH1Q15438 398 aa20.43■□□□□ 0.86
ATG4D-208ENST00000588667 TMCO4Q5TGY1 634 aa20.43■□□□□ 0.86
ATG4D-208ENST00000588667 FBXO38Q6PIJ6 1188 aa20.43■□□□□ 0.86
ATG4D-208ENST00000588667 KBTBD6Q86V97 674 aa20.43■□□□□ 0.86
ATG4D-208ENST00000588667 SUMF1Q8NBK3 374 aa20.43■□□□□ 0.86
ATG4D-208ENST00000588667 CHST14Q8NCH0 376 aa20.43■□□□□ 0.86
ATG4D-208ENST00000588667 PIP4K2CQ8TBX8 421 aa20.43■□□□□ 0.86
ATG4D-208ENST00000588667 GRK7Q8WTQ7 553 aa20.43■□□□□ 0.86
ATG4D-208ENST00000588667 PHOX2BQ99453 314 aa20.43■□□□□ 0.86
ATG4D-208ENST00000588667 RAB17Q9H0T7 212 aa20.43■□□□□ 0.86
ATG4D-208ENST00000588667 DTLQ9NZJ0 730 aa20.43■□□□□ 0.86
ATG4D-208ENST00000588667 LHX3Q9UBR4 397 aa20.43■□□□□ 0.86
ATG4D-208ENST00000588667 IL36AQ9UHA7 158 aa20.43■□□□□ 0.86
ATG4D-208ENST00000588667 UTP11Q9Y3A2 253 aaKnown RBP20.43■□□□□ 0.86
ATG4D-208ENST00000588667 FAM186AA6NE01 2351 aa20.43■□□□□ 0.86
ATG4D-208ENST00000588667 TTI1O43156 1089 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 IGSF6O95976 241 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 LMNAP02545 664 aaKnown RBP20.42■□□□□ 0.86
ATG4D-208ENST00000588667 CTSLP07711 333 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 GUCY2DQ02846 1103 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 PLK5Q496M5 336 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 TTC27Q6P3X3 843 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 DRICH1Q6PGQ1 229 aaPredicted RBP20.42■□□□□ 0.86
ATG4D-208ENST00000588667 TMIEQ8NEW7 156 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 GRIN3AQ8TCU5 1115 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 ATG4AQ8WYN0 398 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 SLCO2A1Q92959 643 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 HEPHQ9BQS7 1158 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 DUSP15Q9H1R2 295 aaPredicted RBP20.42■□□□□ 0.86
ATG4D-208ENST00000588667 FBXL12Q9NXK8 326 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 HECAQ9UBI9 543 aaPredicted RBP20.42■□□□□ 0.86
ATG4D-208ENST00000588667 SARDHQ9UL12 918 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 R3HDM2Q9Y2K5 976 aaKnown RBP20.42■□□□□ 0.86
ATG4D-208ENST00000588667 MAP3K13O43283 966 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 MAP3K6O95382 1288 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 ECEL1O95672 775 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 PEX11BO96011 259 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 DYNLT1P63172 113 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 LMNB2Q03252 620 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 SLC10A2Q12908 348 aaPredicted RBP20.42■□□□□ 0.86
ATG4D-208ENST00000588667 SNX1Q13596 522 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 ATXN7L2Q5T6C5 722 aaPredicted RBP20.42■□□□□ 0.86
ATG4D-208ENST00000588667 PMS2CLQ68D20 193 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 NSMCE1Q8WV22 266 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 TOE1Q96GM8 510 aaKnown RBP20.42■□□□□ 0.86
ATG4D-208ENST00000588667 LRIG1Q96JA1 1093 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 OMDQ99983 421 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 CINPQ9BW66 212 aaPredicted RBP20.42■□□□□ 0.86
ATG4D-208ENST00000588667 EPB41L5Q9HCM4 733 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 GDF3Q9NR23 364 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 WSB2Q9NYS7 404 aaPredicted RBP20.42■□□□□ 0.86
ATG4D-208ENST00000588667 SEPT3Q9UH03 358 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 FZD4Q9ULV1 537 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 NCKAP1Q9Y2A7 1128 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 HEY1Q9Y5J3 304 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 WASF2Q9Y6W5 498 aa20.42■□□□□ 0.86
ATG4D-208ENST00000588667 ANKRD36A6QL64 1941 aa20.41■□□□□ 0.86
ATG4D-208ENST00000588667 A0A1W2PP55 124 aa20.41■□□□□ 0.86
ATG4D-208ENST00000588667 APOC4-APOC2K7ER74 178 aa20.41■□□□□ 0.86
ATG4D-208ENST00000588667 RHOBTB1O94844 696 aa20.41■□□□□ 0.86
ATG4D-208ENST00000588667 APOC2P02655 101 aa20.41■□□□□ 0.86
ATG4D-208ENST00000588667 TNFRSF8P28908 595 aa20.41■□□□□ 0.86
ATG4D-208ENST00000588667 LBRQ14739 615 aaKnown RBP20.41■□□□□ 0.86
ATG4D-208ENST00000588667 MAP9Q49MG5 647 aa20.41■□□□□ 0.86
ATG4D-208ENST00000588667 SPDYCQ5MJ68 293 aa20.41■□□□□ 0.86
ATG4D-208ENST00000588667 TIGD7Q6NT04 549 aaPredicted RBP20.41■□□□□ 0.86
ATG4D-208ENST00000588667 SYDE1Q6ZW31 735 aaPredicted RBP20.41■□□□□ 0.86
ATG4D-208ENST00000588667 JAMLQ86YT9 394 aa20.41■□□□□ 0.86
ATG4D-208ENST00000588667 RYBPQ8N488 228 aaPredicted RBP20.41■□□□□ 0.86
ATG4D-208ENST00000588667 AADATQ8N5Z0 425 aa20.41■□□□□ 0.86
ATG4D-208ENST00000588667 ATL2Q8NHH9 583 aa20.41■□□□□ 0.86
ATG4D-208ENST00000588667 GANCQ8TET4 914 aa20.41■□□□□ 0.86
ATG4D-208ENST00000588667 FATE1Q969F0 183 aa20.41■□□□□ 0.86
ATG4D-208ENST00000588667 HDAC11Q96DB2 347 aa20.41■□□□□ 0.86
ATG4D-208ENST00000588667 TSGA13Q96PP4 275 aa20.41■□□□□ 0.86
ATG4D-208ENST00000588667 PSKH2Q96QS6 385 aa20.41■□□□□ 0.86
ATG4D-208ENST00000588667 ZDHHC6Q9H6R6 413 aa20.41■□□□□ 0.86
ATG4D-208ENST00000588667 SERGEFQ9UGK8 458 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms