RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.44□□□□□ -0.58
VMP1-207ENST00000588131 EIF3HO15372 352 aaKnown RBP eCLIP11.44□□□□□ -0.58
VMP1-207ENST00000588131 NARSO43776 548 aaKnown RBP11.44□□□□□ -0.58
VMP1-207ENST00000588131 ASLP04424 464 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 MLNP12872 115 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 BMP1P13497 986 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 MGAT1P26572 445 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 EIF2DP41214 584 aaKnown RBP11.44□□□□□ -0.58
VMP1-207ENST00000588131 MAGEA4P43358 317 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 CHRNA4P43681 627 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 SESN2P58004 480 aaPredicted RBP11.44□□□□□ -0.58
VMP1-207ENST00000588131 SARNPP82979 210 aaKnown RBP11.44□□□□□ -0.58
VMP1-207ENST00000588131 NSUN2Q08J23 767 aaKnown RBP eCLIP11.44□□□□□ -0.58
VMP1-207ENST00000588131 CBLBQ13191 982 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 SLMAPQ14BN4 828 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 DLG2Q15700 870 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 ACCSLQ4AC99 568 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 IER5LQ5T953 404 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 NAPEPLDQ6IQ20 393 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 DENND5AQ6IQ26 1287 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 KDELC2Q7Z4H8 507 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 SRLQ86TD4 932 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 METTL3Q86U44 580 aaKnown RBP11.44□□□□□ -0.58
VMP1-207ENST00000588131 RELL1Q8IUW5 271 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 IGDCC3Q8IVU1 814 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 ZBED8Q8IZ13 594 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 MPP5Q8N3R9 675 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 MAFAQ8NHW3 353 aaPredicted RBP11.44□□□□□ -0.58
VMP1-207ENST00000588131 VOPP1Q96AW1 172 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 SIGLEC10Q96LC7 697 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 C9orf72Q96LT7 481 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 FRMD8Q9BZ67 464 aaPredicted RBP11.44□□□□□ -0.58
VMP1-207ENST00000588131 PHACTR1Q9C0D0 580 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 CEP44Q9C0F1 390 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 MTG2Q9H4K7 406 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 XAB2Q9HCS7 855 aaKnown RBP11.44□□□□□ -0.58
VMP1-207ENST00000588131 VPS45Q9NRW7 570 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 HAUS2Q9NVX0 235 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 EVLQ9UI08 416 aaPredicted RBP11.44□□□□□ -0.58
VMP1-207ENST00000588131 HCN2Q9UL51 889 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 CHMP2BQ9UQN3 213 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 MYLKQ15746 1914 aa11.44□□□□□ -0.58
VMP1-207ENST00000588131 LOC730098B7Z3J9 87 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 SPECC1L-ADORA2AF8WAN1 911 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 ALOX15BO15296 676 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 ATP9BO43861 1147 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 KAT7O95251 611 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 IGSF6O95976 241 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 GSRP00390 522 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 ATP5BP06576 529 aaKnown RBP11.43□□□□□ -0.58
VMP1-207ENST00000588131 SRPRAP08240 638 aaKnown RBP11.43□□□□□ -0.58
VMP1-207ENST00000588131 SERPINF2P08697 491 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 DLDP09622 509 aaKnown RBP11.43□□□□□ -0.58
VMP1-207ENST00000588131 ATXN1LP0C7T5 689 aaKnown RBP11.43□□□□□ -0.58
VMP1-207ENST00000588131 TPH1P17752 444 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 CES1P23141 567 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 GKP32189 559 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 HSD17B3P37058 310 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 ELK3P41970 407 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 CSNK1DP48730 415 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 VASPP50552 380 aaPredicted RBP11.43□□□□□ -0.58
VMP1-207ENST00000588131 GALK1P51570 392 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 CRADDP78560 199 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 TRAF2Q12933 501 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 CASP8Q14790 479 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 EIF4HQ15056 248 aaKnown RBP11.43□□□□□ -0.58
VMP1-207ENST00000588131 SLC14A2Q15849 920 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 KYNUQ16719 465 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 PUS10Q3MIT2 529 aaKnown RBP11.43□□□□□ -0.58
VMP1-207ENST00000588131 TXNDC11Q6PKC3 985 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 RANBP10Q6VN20 620 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 Q6ZVU0 165 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 LINC00523Q86TU6 105 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 RYBPQ8N488 228 aaPredicted RBP11.43□□□□□ -0.58
VMP1-207ENST00000588131 SLC25A41Q8N5S1 370 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 PCDH20Q8N6Y1 951 aaKnown RBP11.43□□□□□ -0.58
VMP1-207ENST00000588131 ZNF366Q8N895 744 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 FBXO36Q8NEA4 188 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 OR2AP1Q8NGE2 309 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 FRS2Q8WU20 508 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 UBLCP1Q8WVY7 318 aaPredicted RBP11.43□□□□□ -0.58
VMP1-207ENST00000588131 EZH1Q92800 747 aaPredicted RBP11.43□□□□□ -0.58
VMP1-207ENST00000588131 ISG20Q96AZ6 181 aaKnown RBP11.43□□□□□ -0.58
VMP1-207ENST00000588131 TRIB3Q96RU7 358 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 TRIM56Q9BRZ2 755 aaKnown RBP11.43□□□□□ -0.58
VMP1-207ENST00000588131 FSD1LQ9BXM9 530 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 TDRD1Q9BXT4 1180 aaKnown RBP11.43□□□□□ -0.58
VMP1-207ENST00000588131 FUT8Q9BYC5 575 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 TSPYL1Q9H0U9 437 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 ZDHHC4Q9NPG8 344 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 TRPV5Q9NQA5 729 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 HEBP1Q9NRV9 189 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 SYBUQ9NX95 663 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 PCDHGC4Q9Y5F7 938 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 RAI2Q9Y5P3 530 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.43□□□□□ -0.58
VMP1-207ENST00000588131 TEX264Q9Y6I9 313 aa11.43□□□□□ -0.58
VMP1-207ENST00000588131 LOC285095A0A1B0GVY8 99 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 TBC1D3BA6NDS4 549 aa11.42□□□□□ -0.58
VMP1-207ENST00000588131 RIPK2O43353 540 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms