RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 CELA2AP08217 269 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 LINC00271P0C7V0 271 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 MCF2P10911 925 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 GAP43P17677 238 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 DNAJB1P25685 340 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 HOXC13P31276 330 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 RAD52P43351 418 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 RECQLP46063 649 aaPredicted RBP4.97□□□□□ -1.61
ZNF540-204ENST00000586792 STT3AP46977 705 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 SLC11A1P49279 550 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 GLUD2P49448 558 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 OSTNP61366 133 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 KRT85P78386 507 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 ROR1Q01973 937 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 CLUL1Q15846 466 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 SRSF7Q16629 238 aaKnown RBP eCLIP4.97□□□□□ -1.61
ZNF540-204ENST00000586792 KYAT1Q16773 422 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 BMT2Q1RMZ1 405 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 LEXMQ3ZCV2 418 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 LMBRD2Q68DH5 695 aaPredicted RBP4.97□□□□□ -1.61
ZNF540-204ENST00000586792 CES5AQ6NT32 575 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 UNQ6494/PRO21346Q6UXR6 183 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 C1orf186Q6ZWK4 172 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 KCNK18Q7Z418 384 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 HAUS6Q7Z4H7 955 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 ZZZ3Q8IYH5 903 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 CEP57L1Q8IYX8 460 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 SYCP3Q8IZU3 236 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 EFHBQ8N7U6 833 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 VMP1Q96GC9 406 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 EPSTI1Q96J88 318 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 LRGUKQ96M69 825 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 UROC1Q96N76 676 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 ACAP3Q96P50 834 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 SPAG5Q96R06 1193 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 CUEDC2Q9H467 287 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 IFT22Q9H7X7 185 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 MRPL44Q9H9J2 332 aaKnown RBP4.97□□□□□ -1.61
ZNF540-204ENST00000586792 POLD4Q9HCU8 107 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 BLOC1S4Q9NUP1 217 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 RRN3Q9NYV6 651 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 SEL1LQ9UBV2 794 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 DNAJB4Q9UDY4 337 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 CD207Q9UJ71 328 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 EXOC7Q9UPT5 735 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 TNFSF13BQ9Y275 285 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 PCDHGB3Q9Y5G1 929 aa4.97□□□□□ -1.61
ZNF540-204ENST00000586792 ATG2AQ2TAZ0 1938 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.96□□□□□ -1.62
ZNF540-204ENST00000586792 A0A1B0GVC2 190 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 GOLGA6L4A6NEF3 574 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 CASTOR2A6NHX0 329 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 HIDE1A8MVS5 230 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 TOR1BO14657 336 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 PER2O15055 1255 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 INPPL1O15357 1258 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 LINC01565O15544 149 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 NRP2O60462 931 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 PLOD3O60568 738 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 TBX10O75333 385 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 DDHD2O94830 711 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 GCNT3O95395 438 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 MYBL2P10244 700 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 CTSAP10619 480 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 IL9P15248 144 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 HOXB8P17481 243 aaPredicted RBP4.96□□□□□ -1.62
ZNF540-204ENST00000586792 CAPN3P20807 821 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 KLRC2P26717 231 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 CHKAP35790 457 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 CLNS1AP54105 237 aaKnown RBP4.96□□□□□ -1.62
ZNF540-204ENST00000586792 NAP1L1P55209 391 aaKnown RBP4.96□□□□□ -1.62
ZNF540-204ENST00000586792 KRT83P78385 493 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 ELAVL2Q12926 359 aaKnown RBP4.96□□□□□ -1.62
ZNF540-204ENST00000586792 ALCAMQ13740 583 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 DUSP6Q16828 381 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 USP41Q3LFD5 358 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 GLRA4Q5JXX5 417 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 METRNLQ641Q3 311 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 HIBCHQ6NVY1 386 aaPredicted RBP4.96□□□□□ -1.62
ZNF540-204ENST00000586792 FUT10Q6P4F1 479 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 EPM2AIP1Q7L775 607 aaPredicted RBP4.96□□□□□ -1.62
ZNF540-204ENST00000586792 ADGRD2Q7Z7M1 963 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 ZNF280BQ86YH2 543 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 CCDC65Q8IXS2 484 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 DAW1Q8N136 415 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 TMEM132CQ8N3T6 1108 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 MRPL43Q8N983 215 aaKnown RBP4.96□□□□□ -1.62
ZNF540-204ENST00000586792 IQUBQ8NA54 791 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 LINC00301Q8NCQ3 95 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 NOC3LQ8WTT2 800 aaKnown RBP4.96□□□□□ -1.62
ZNF540-204ENST00000586792 COG1Q8WTW3 980 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 DHX58Q96C10 678 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 HVCN1Q96D96 273 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 RIPOR3Q96MK2 946 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 ACO2Q99798 780 aaKnown RBP4.96□□□□□ -1.62
ZNF540-204ENST00000586792 NTPCRQ9BSD7 190 aaKnown RBP4.96□□□□□ -1.62
ZNF540-204ENST00000586792 MSTO1Q9BUK6 570 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 HERC2P3Q9BVR0 1158 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 ADGRE3Q9BY15 652 aa4.96□□□□□ -1.62
ZNF540-204ENST00000586792 SLC13A1Q9BZW2 595 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms