RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 COL5A1P20908 1838 aaPredicted RBP18.28■□□□□ 0.52
SRSF1-208ENST00000584773 A0A087X0T9 212 aa18.27■□□□□ 0.52
SRSF1-208ENST00000584773 ZSCAN5CA6NGD5 496 aaPredicted RBP18.27■□□□□ 0.52
SRSF1-208ENST00000584773 IGLON5A6NGN9 336 aa18.27■□□□□ 0.52
SRSF1-208ENST00000584773 TNFSF14O43557 240 aa18.27■□□□□ 0.52
SRSF1-208ENST00000584773 PRPSAP2O60256 369 aa18.27■□□□□ 0.52
SRSF1-208ENST00000584773 RNF8O76064 485 aa18.27■□□□□ 0.52
SRSF1-208ENST00000584773 DKK1O94907 266 aa18.27■□□□□ 0.52
SRSF1-208ENST00000584773 POP4O95707 220 aaKnown RBP18.27■□□□□ 0.52
SRSF1-208ENST00000584773 PAK4O96013 591 aaPredicted RBP18.27■□□□□ 0.52
SRSF1-208ENST00000584773 FAM228BP0C875 321 aa18.27■□□□□ 0.52
SRSF1-208ENST00000584773 ERCC2P18074 760 aa18.27■□□□□ 0.52
SRSF1-208ENST00000584773 AKT2P31751 481 aa18.27■□□□□ 0.52
SRSF1-208ENST00000584773 ARRB1P49407 418 aaPredicted RBP18.27■□□□□ 0.52
SRSF1-208ENST00000584773 PAPOLAP51003 745 aaKnown RBP18.27■□□□□ 0.52
SRSF1-208ENST00000584773 CLDN6P56747 220 aa18.27■□□□□ 0.52
SRSF1-208ENST00000584773 ZBED6P86452 979 aa18.27■□□□□ 0.52
SRSF1-208ENST00000584773 TXNRD3NBQ6F5E7 133 aa18.27■□□□□ 0.52
SRSF1-208ENST00000584773 RFX8Q6ZV50 586 aa18.27■□□□□ 0.52
SRSF1-208ENST00000584773 ARHGAP12Q8IWW6 846 aa18.27■□□□□ 0.52
SRSF1-208ENST00000584773 SLC22A18ASQ8N1D0 253 aa18.27■□□□□ 0.52
SRSF1-208ENST00000584773 FNIP1Q8TF40 1166 aa18.27■□□□□ 0.52
SRSF1-208ENST00000584773 ARHGEF26Q96DR7 871 aa18.27■□□□□ 0.52
SRSF1-208ENST00000584773 BMFQ96LC9 184 aa18.27■□□□□ 0.52
SRSF1-208ENST00000584773 GDAP1L1Q96MZ0 367 aa18.27■□□□□ 0.52
SRSF1-208ENST00000584773 SLC17A9Q9BYT1 436 aa18.27■□□□□ 0.52
SRSF1-208ENST00000584773 XPO4Q9C0E2 1151 aaKnown RBP18.27■□□□□ 0.52
SRSF1-208ENST00000584773 ERVMER34-1Q9H9K5 563 aa18.27■□□□□ 0.52
SRSF1-208ENST00000584773 UBA2Q9UBT2 640 aaPredicted RBP18.27■□□□□ 0.52
SRSF1-208ENST00000584773 ZMIZ1Q9ULJ6 1067 aa18.27■□□□□ 0.52
SRSF1-208ENST00000584773 CAPN11Q9UMQ6 739 aa18.27■□□□□ 0.52
SRSF1-208ENST00000584773 GOLGA4Q13439 2230 aaKnown RBP18.27■□□□□ 0.51
SRSF1-208ENST00000584773 ANKRD36A6QL64 1941 aa18.27■□□□□ 0.51
SRSF1-208ENST00000584773 POM121BA6NF01 834 aa18.26■□□□□ 0.51
SRSF1-208ENST00000584773 AP1G1O43747 822 aa18.26■□□□□ 0.51
SRSF1-208ENST00000584773 IGSF6O95976 241 aa18.26■□□□□ 0.51
SRSF1-208ENST00000584773 SERPING1P05155 500 aa18.26■□□□□ 0.51
SRSF1-208ENST00000584773 RGRP47804 291 aa18.26■□□□□ 0.51
SRSF1-208ENST00000584773 RXRGP48443 463 aa18.26■□□□□ 0.51
SRSF1-208ENST00000584773 RPS21P63220 83 aaKnown RBP18.26■□□□□ 0.51
SRSF1-208ENST00000584773 INO80DQ53TQ3 878 aaPredicted RBP18.26■□□□□ 0.51
SRSF1-208ENST00000584773 ZNF542PQ5EBM4 170 aa18.26■□□□□ 0.51
SRSF1-208ENST00000584773 KIAA1161Q6NSJ0 714 aa18.26■□□□□ 0.51
SRSF1-208ENST00000584773 GDPD4Q6W3E5 623 aa18.26■□□□□ 0.51
SRSF1-208ENST00000584773 CPNE8Q86YQ8 564 aa18.26■□□□□ 0.51
SRSF1-208ENST00000584773 TRIM11Q96F44 468 aa18.26■□□□□ 0.51
SRSF1-208ENST00000584773 CNDP2Q96KP4 475 aaKnown RBP18.26■□□□□ 0.51
SRSF1-208ENST00000584773 ZWILCHQ9H900 591 aa18.26■□□□□ 0.51
SRSF1-208ENST00000584773 CWC15Q9P013 229 aaKnown RBP18.26■□□□□ 0.51
SRSF1-208ENST00000584773 LRRK1Q38SD2 2015 aa18.26■□□□□ 0.51
SRSF1-208ENST00000584773 ZFHX4Q86UP3 3567 aa18.26■□□□□ 0.51
SRSF1-208ENST00000584773 FAM149AA5PLN7 773 aa18.25■□□□□ 0.51
SRSF1-208ENST00000584773 FAM221BA6H8Z2 402 aa18.25■□□□□ 0.51
SRSF1-208ENST00000584773 ENC1O14682 589 aa18.25■□□□□ 0.51
SRSF1-208ENST00000584773 DAPK3O43293 454 aa18.25■□□□□ 0.51
SRSF1-208ENST00000584773 PRAMEF11O60813 436 aa18.25■□□□□ 0.51
SRSF1-208ENST00000584773 MYBL1P10243 752 aa18.25■□□□□ 0.51
SRSF1-208ENST00000584773 CASP14P31944 242 aa18.25■□□□□ 0.51
SRSF1-208ENST00000584773 NDST2P52849 883 aa18.25■□□□□ 0.51
SRSF1-208ENST00000584773 OVGP1Q12889 678 aa18.25■□□□□ 0.51
SRSF1-208ENST00000584773 NFKBIBQ15653 356 aa18.25■□□□□ 0.51
SRSF1-208ENST00000584773 INAVAQ3KP66 663 aa18.25■□□□□ 0.51
SRSF1-208ENST00000584773 TPRG1LQ5T0D9 272 aa18.25■□□□□ 0.51
SRSF1-208ENST00000584773 DHRS13Q6UX07 377 aa18.25■□□□□ 0.51
SRSF1-208ENST00000584773 Q6ZSR6 202 aa18.25■□□□□ 0.51
SRSF1-208ENST00000584773 PTAR1Q7Z6K3 402 aaPredicted RBP18.25■□□□□ 0.51
SRSF1-208ENST00000584773 ABI3BPQ7Z7G0 1075 aa18.25■□□□□ 0.51
SRSF1-208ENST00000584773 HSPH1Q92598 858 aa18.25■□□□□ 0.51
SRSF1-208ENST00000584773 SYN2Q92777 582 aaPredicted RBP18.25■□□□□ 0.51
SRSF1-208ENST00000584773 LRIG1Q96JA1 1093 aa18.25■□□□□ 0.51
SRSF1-208ENST00000584773 FEM1CQ96JP0 617 aa18.25■□□□□ 0.51
SRSF1-208ENST00000584773 ETNK2Q9NVF9 386 aa18.25■□□□□ 0.51
SRSF1-208ENST00000584773 UCKL1Q9NWZ5 548 aa18.25■□□□□ 0.51
SRSF1-208ENST00000584773 DFFAO00273 331 aa18.24■□□□□ 0.51
SRSF1-208ENST00000584773 NEMP1O14524 444 aa18.24■□□□□ 0.51
SRSF1-208ENST00000584773 YKT6O15498 198 aa18.24■□□□□ 0.51
SRSF1-208ENST00000584773 MAGEC1O60732 1142 aa18.24■□□□□ 0.51
SRSF1-208ENST00000584773 LDOC1O95751 146 aaPredicted RBP18.24■□□□□ 0.51
SRSF1-208ENST00000584773 PRKCGP05129 697 aa18.24■□□□□ 0.51
SRSF1-208ENST00000584773 TIMP2P16035 220 aa18.24■□□□□ 0.51
SRSF1-208ENST00000584773 HTR7P34969 479 aa18.24■□□□□ 0.51
SRSF1-208ENST00000584773 SEMG2Q02383 582 aa18.24■□□□□ 0.51
SRSF1-208ENST00000584773 DPYSQ14117 519 aa18.24■□□□□ 0.51
SRSF1-208ENST00000584773 AFMIDQ63HM1 303 aa18.24■□□□□ 0.51
SRSF1-208ENST00000584773 TTC7BQ86TV6 843 aa18.24■□□□□ 0.51
SRSF1-208ENST00000584773 OXR1Q8N573 874 aa18.24■□□□□ 0.51
SRSF1-208ENST00000584773 KDF1Q8NAX2 398 aaPredicted RBP18.24■□□□□ 0.51
SRSF1-208ENST00000584773 CASKIN2Q8WXE0 1202 aa18.24■□□□□ 0.51
SRSF1-208ENST00000584773 ZCCHC14Q8WYQ9 949 aaKnown RBP18.24■□□□□ 0.51
SRSF1-208ENST00000584773 KLF6Q99612 283 aaPredicted RBP18.24■□□□□ 0.51
SRSF1-208ENST00000584773 NUP85Q9BW27 656 aa18.24■□□□□ 0.51
SRSF1-208ENST00000584773 OSBPL1AQ9BXW6 950 aa18.24■□□□□ 0.51
SRSF1-208ENST00000584773 MRPL47Q9HD33 250 aaKnown RBP18.24■□□□□ 0.51
SRSF1-208ENST00000584773 LUC7L2Q9Y383 392 aaKnown RBP18.24■□□□□ 0.51
SRSF1-208ENST00000584773 FREM2Q5SZK8 3169 aa18.24■□□□□ 0.51
SRSF1-208ENST00000584773 ARHGAP42A6NI28 874 aa18.23■□□□□ 0.51
SRSF1-208ENST00000584773 A6NNZ2 444 aa18.23■□□□□ 0.51
SRSF1-208ENST00000584773 TRIM38O00635 465 aa18.23■□□□□ 0.51
SRSF1-208ENST00000584773 AREL1O15033 823 aa18.23■□□□□ 0.51
SRSF1-208ENST00000584773 BUB1BO60566 1050 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms