RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 ALLCQ8N6M5 410 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 RERGQ96A58 199 aaPredicted RBP5.17□□□□□ -1.58
NF1-219ENST00000579081 MAGEB18Q96M61 343 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 TRIM9Q9C026 710 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 CCSER1Q9C0I3 900 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 LMAN2LQ9H0V9 348 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 NOD2Q9HC29 1040 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 SMPD4Q9NXE4 827 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 TMEM216Q9P0N5 145 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 RAB26Q9ULW5 256 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 PPP2R3BQ9Y5P8 575 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 IQGAP1P46940 1657 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 SGTAO43765 313 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 MAP3K6O95382 1288 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 HOXC12P31275 282 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 GMPSP49915 693 aaPredicted RBP5.17□□□□□ -1.58
NF1-219ENST00000579081 MSLNQ13421 630 aaPredicted RBP5.17□□□□□ -1.58
NF1-219ENST00000579081 TOB2Q14106 344 aaPredicted RBP5.17□□□□□ -1.58
NF1-219ENST00000579081 GALNT3Q14435 633 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 RASA2Q15283 850 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 PCBP1Q15365 356 aaKnown RBP eCLIP5.17□□□□□ -1.582e-7■■■■■ 38.6
NF1-219ENST00000579081 NEDD8Q15843 81 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 EIF2S3LQ2VIR3 472 aaKnown RBP5.17□□□□□ -1.58
NF1-219ENST00000579081 GLT6D1Q7Z4J2 308 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 C8orf59Q8N0T1 100 aaPredicted RBP5.17□□□□□ -1.58
NF1-219ENST00000579081 SPAG16Q8N0X2 631 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 ITFG1Q8TB96 612 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 MTFMTQ96DP5 389 aaKnown RBP5.17□□□□□ -1.58
NF1-219ENST00000579081 RTFDC1Q9BY42 306 aaPredicted RBP5.17□□□□□ -1.58
NF1-219ENST00000579081 FBXO44Q9H4M3 255 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 RBM12Q9NTZ6 932 aaKnown RBP5.17□□□□□ -1.58
NF1-219ENST00000579081 CLN6Q9NWW5 311 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 MTMR4Q9NYA4 1195 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 TAS2R1Q9NYW7 299 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 OPTCQ9UBM4 332 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 TUBE1Q9UJT0 475 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 GTF3C4Q9UKN8 822 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 DAGLAQ9Y4D2 1042 aa5.17□□□□□ -1.58
NF1-219ENST00000579081 CPDO75976 1380 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 PDE2AO00408 941 aaPredicted RBP5.16□□□□□ -1.58
NF1-219ENST00000579081 GMFGO60234 142 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 BMP7P18075 431 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 RPL17P18621 184 aaKnown RBP5.16□□□□□ -1.58
NF1-219ENST00000579081 BST2Q10589 180 aaKnown RBP5.16□□□□□ -1.58
NF1-219ENST00000579081 PEX6Q13608 980 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 FAM187BQ17R55 369 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 ARMC12Q5T9G4 340 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 TCEAL6Q6IPX3 200 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 SLC26A11Q86WA9 606 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 FAM131BQ86XD5 332 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 CLVS1Q8IUQ0 354 aaPredicted RBP5.16□□□□□ -1.58
NF1-219ENST00000579081 LGI2Q8N0V4 545 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 ADSSL1Q8N142 457 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 LRRC17Q8N6Y2 441 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 GALNT6Q8NCL4 622 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 C5orf34Q96MH7 638 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 ZIM3Q96PE6 472 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 C9orf16Q9BUW7 83 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 SIAEQ9HAT2 523 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.16□□□□□ -1.58
NF1-219ENST00000579081 INVSQ9Y283 1065 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 C1QTNF3-AMACRE9PGA6 284 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 FOXN1O15353 648 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 TMCC2O75069 709 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 PGK1P00558 417 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 SERPINA1P01009 418 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 PROZP22891 400 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 SLC29A2Q14542 456 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 QPRTQ15274 297 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 SEZ6Q53EL9 994 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 GRTP1Q5TC63 336 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 PRAMEF18Q5VWM3 479 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 OAFQ86UD1 273 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 DAW1Q8N136 415 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 DHRSXQ8N5I4 330 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 ATG4CQ96DT6 458 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 TRMOQ9BU70 441 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 QPCTLQ9NXS2 382 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 BAIAP2Q9UQB8 552 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 IRAK3Q9Y616 596 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 ZNF521Q96K83 1311 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 CASTOR2A6NHX0 329 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 UBE2Q2LH0YL09 131 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 TFECO14948 347 aaPredicted RBP5.16□□□□□ -1.58
NF1-219ENST00000579081 PSIP1O75475 530 aaKnown RBP5.16□□□□□ -1.58
NF1-219ENST00000579081 S100A6P06703 90 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 PAEPP09466 180 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 TFPIP10646 304 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 CRABP2P29373 138 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 RAB27AP51159 221 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 SMIM11AP58511 58 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 BTN3A2P78410 334 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 FASTKQ14296 549 aaKnown RBP5.16□□□□□ -1.58
NF1-219ENST00000579081 PTGISQ16647 500 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 USP45Q70EL2 814 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 PARP8Q8N3A8 854 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 USP38Q8NB14 1042 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 VPS35Q96QK1 796 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 OSBPL11Q9BXB4 747 aa5.16□□□□□ -1.58
NF1-219ENST00000579081 SENP6Q9GZR1 1112 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms