RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 DNAI1Q9UI46 699 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 RABGEF1Q9UJ41 708 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 COQ6Q9Y2Z9 468 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 FHOD1Q9Y613 1164 aa12.27□□□□□ -0.45
CAPN3-220ENST00000569827 ILVBLA1L0T0 632 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 EME2A4GXA9 379 aaPredicted RBP12.26□□□□□ -0.45
CAPN3-220ENST00000569827 FAM72CH0Y354 149 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 SLC28A2O43868 658 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 MMP20O60882 483 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 HGFP14210 728 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 UCNP55089 124 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 PFN3P60673 137 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 NFKB2Q00653 900 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 CLN3Q13286 438 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 CAMK4Q16566 473 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 C15orf59Q2T9L4 293 aaPredicted RBP12.26□□□□□ -0.45
CAPN3-220ENST00000569827 SLC25A52Q3SY17 297 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 FAM72AQ5TYM5 149 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 FAM72DQ6L9T8 149 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 RETSATQ6NUM9 610 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 FAM72BQ86X60 149 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
CAPN3-220ENST00000569827 KYQ8NBH2 561 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 CPA5Q8WXQ8 436 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 KLHL32Q96NJ5 620 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 CCDC3Q9BQI4 270 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 WRAP53Q9BUR4 548 aaKnown RBP12.26□□□□□ -0.45
CAPN3-220ENST00000569827 C1QTNF2Q9BXJ5 285 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 FOXP3Q9BZS1 431 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 ZYG11BQ9C0D3 744 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 METTL5Q9NRN9 209 aaKnown RBP12.26□□□□□ -0.45
CAPN3-220ENST00000569827 EVA1BQ9NVM1 165 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 GULP1Q9UBP9 304 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 NBASA2RRP1 2371 aa12.26□□□□□ -0.45
CAPN3-220ENST00000569827 CDRT15L2A8MXV6 281 aa12.25□□□□□ -0.45
CAPN3-220ENST00000569827 INSIG1O15503 277 aa12.25□□□□□ -0.45
CAPN3-220ENST00000569827 AP1G1O43747 822 aa12.25□□□□□ -0.45
CAPN3-220ENST00000569827 TSHRP16473 764 aa12.25□□□□□ -0.45
CAPN3-220ENST00000569827 THOP1P52888 689 aa12.25□□□□□ -0.45
CAPN3-220ENST00000569827 SKOR1P84550 965 aa12.25□□□□□ -0.45
CAPN3-220ENST00000569827 SPIDRQ14159 915 aa12.25□□□□□ -0.45
CAPN3-220ENST00000569827 TGIF1Q15583 401 aa12.25□□□□□ -0.45
CAPN3-220ENST00000569827 FAXCQ5TGI0 409 aa12.25□□□□□ -0.45
CAPN3-220ENST00000569827 KCTD16Q68DU8 428 aa12.25□□□□□ -0.45
CAPN3-220ENST00000569827 RWDD4Q6NW29 188 aaKnown RBP12.25□□□□□ -0.45
CAPN3-220ENST00000569827 PRICKLE2Q7Z3G6 844 aa12.25□□□□□ -0.45
CAPN3-220ENST00000569827 RD3Q7Z3Z2 195 aa12.25□□□□□ -0.45
CAPN3-220ENST00000569827 DCP2Q8IU60 420 aaKnown RBP12.25□□□□□ -0.45
CAPN3-220ENST00000569827 TSACCQ96A04 125 aaPredicted RBP12.25□□□□□ -0.45
CAPN3-220ENST00000569827 C18orf8Q96DM3 657 aa12.25□□□□□ -0.45
CAPN3-220ENST00000569827 PGAP3Q96FM1 320 aaPredicted RBP12.25□□□□□ -0.45
CAPN3-220ENST00000569827 BOCQ9BWV1 1114 aa12.25□□□□□ -0.45
CAPN3-220ENST00000569827 DPH1Q9BZG8 443 aa12.25□□□□□ -0.45
CAPN3-220ENST00000569827 CEP44Q9C0F1 390 aa12.25□□□□□ -0.45
CAPN3-220ENST00000569827 USP29Q9HBJ7 922 aa12.25□□□□□ -0.45
CAPN3-220ENST00000569827 EPB41L5Q9HCM4 733 aa12.25□□□□□ -0.45
CAPN3-220ENST00000569827 SPASTQ9UBP0 616 aa12.25□□□□□ -0.45
CAPN3-220ENST00000569827 B8ZZF3 427 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 K7ENP7 123 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 YY2O15391 372 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 LZTS3O60299 673 aaPredicted RBP12.24□□□□□ -0.45
CAPN3-220ENST00000569827 FGFR1OPO95684 399 aaKnown RBP12.24□□□□□ -0.45
CAPN3-220ENST00000569827 ANXA6P08133 673 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 MMEP08473 750 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 C6P13671 934 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 CYP11B1P15538 503 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 CDH5P33151 784 aaPredicted RBP12.24□□□□□ -0.45
CAPN3-220ENST00000569827 GABRB2P47870 512 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 MTA1Q13330 715 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 IRF4Q15306 451 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 ZNF805Q5CZA5 627 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 C6orf132Q5T0Z8 1188 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 NAA35Q5VZE5 725 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 DPY19L2P1Q6NXN4 242 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 INO80CQ6PI98 192 aaPredicted RBP12.24□□□□□ -0.45
CAPN3-220ENST00000569827 CCDC81Q6ZN84 652 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 NOP9Q86U38 636 aaKnown RBP12.24□□□□□ -0.45
CAPN3-220ENST00000569827 ZNF354CQ86Y25 554 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 JAMLQ86YT9 394 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 HID1Q8IV36 788 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 SFTPA2Q8IWL1 248 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 ELOA2Q8IYF1 753 aaPredicted RBP12.24□□□□□ -0.45
CAPN3-220ENST00000569827 FAM71AQ8IYT1 594 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 SDR16C5Q8N3Y7 309 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 TMEM35BQ8NCS4 154 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 WDR36Q8NI36 951 aaKnown RBP12.24□□□□□ -0.45
CAPN3-220ENST00000569827 PCDH19Q8TAB3 1148 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 SLC20A1Q8WUM9 679 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 ARHGEF2Q92974 986 aaKnown RBP12.24□□□□□ -0.45
CAPN3-220ENST00000569827 CCDC74AQ96AQ1 378 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 CENPTQ96BT3 561 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 EXOC2Q96KP1 924 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 FAM81BQ96LP2 452 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 C1orf74Q96LT6 269 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 KLC2Q9H0B6 622 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 RRN3Q9NYV6 651 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 RWDD2AQ9UIY3 292 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 SALL4Q9UJQ4 1053 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 TMEM59LQ9UK28 342 aa12.24□□□□□ -0.45
CAPN3-220ENST00000569827 CSNK1G3Q9Y6M4 447 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms