RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 CYP1A1P04798 512 aaPredicted RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 SRPRAP08240 638 aaKnown RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 CYP3A4P08684 503 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 CYP2A6P11509 494 aaPredicted RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 PDGFRAP16234 1089 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 ZNF37AP17032 561 aaPredicted RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 PTPN2P17706 415 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 GNAT2P19087 354 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 TFEBP19484 476 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 TACR2P21452 398 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 MTNR1AP48039 350 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 CCR3P51677 355 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 TKTL1P51854 596 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 LUMP51884 338 aaPredicted RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 NME5P56597 212 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 HSD11B2P80365 405 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 GRAPQ13588 217 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 RIN1Q13671 783 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 ITGA7Q13683 1181 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 TUBB2AQ13885 445 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 BAATQ14032 418 aaPredicted RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 SF3B3Q15393 1217 aaKnown RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 CSRP2Q16527 193 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 TAZQ16635 292 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 ST3GAL2Q16842 350 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 ALG11Q2TAA5 492 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 EDRF1Q3B7T1 1238 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 ZNF568Q3ZCX4 644 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 CRY2Q49AN0 593 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 HSP90AA5PQ58FG0 334 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 SPDYAQ5MJ70 313 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 MEX3CQ5U5Q3 659 aaKnown RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 KRT39Q6A163 491 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 TMEM270Q6UE05 265 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 GLDNQ6ZMI3 551 aaPredicted RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 Q6ZUG5 572 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 ERN2Q76MJ5 926 aaKnown RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 CAMKMTQ7Z624 323 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 CAND1Q86VP6 1230 aaKnown RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 CCDC13Q8IYE1 715 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 MMP21Q8N119 569 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 CPXM2Q8N436 756 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 SFRP1Q8N474 314 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 TC2NQ8N9U0 490 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 XXYLT1Q8NBI6 393 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 ST7LQ8TDW4 575 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 DENND1AQ8TEH3 1009 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 ZNF483Q8TF39 744 aaPredicted RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 C2CD4CQ8TF44 421 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 PRCCQ92733 491 aaPredicted RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 ZNF622Q969S3 477 aaKnown RBP eCLIP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 SYAP1Q96A49 352 aaPredicted RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 R3HDM4Q96D70 268 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 HDAC11Q96DB2 347 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 PABPC5Q96DU9 382 aaKnown RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 TRIM44Q96DX7 344 aaPredicted RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 PRR11Q96HE9 360 aaPredicted RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 ZNF512Q96ME7 567 aaPredicted RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 ZNF558Q96NG5 402 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 MAP7D2Q96T17 732 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 PNKPQ96T60 521 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 FAM118BQ9BPY3 351 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 PIMREGQ9BSJ6 248 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 SPXQ9BT56 116 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 TUBB2BQ9BVA1 445 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 UTP14AQ9BVJ6 771 aaKnown RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 NUP85Q9BW27 656 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 ELOVL1Q9BW60 279 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 STRA6Q9BX79 667 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 CACNG6Q9BXT2 260 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 MRPL1Q9BYD6 325 aaKnown RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 C12orf65Q9H3J6 166 aaKnown RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 OSGEPL1Q9H4B0 414 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 SAP30LQ9HAJ7 183 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 PCDH18Q9HCL0 1135 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 RANGRFQ9HD47 186 aaPredicted RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 IL1RAPL2Q9NP60 686 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 SEPT10Q9P0V9 454 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 KIAA1456Q9P272 454 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 CTTNBP2NLQ9P2B4 639 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 CNOT8Q9UFF9 292 aaKnown RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 HAO1Q9UJM8 370 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 OSGIN1Q9UJX0 560 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 DUSP12Q9UNI6 340 aa3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 R3HDM2Q9Y2K5 976 aaKnown RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 EPN1Q9Y6I3 576 aaPredicted RBP3.44□□□□□ -1.86
HERPUD1-211ENST00000566550 RNF103-CHMP3A0A140T963 221 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 CCDC151A5D8V7 595 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 LRRC72A6NJI9 287 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 C3orf70A6NLC5 250 aaPredicted RBP3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 ENO4A6NNW6 628 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 CDRT15L2A8MXV6 281 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 RNF103O00237 685 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 PPM1DO15297 605 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 ASAP2O43150 1006 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 STRNO43815 780 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 FZD7O75084 574 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 USP12O75317 370 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 NDUFS3O75489 264 aa3.43□□□□□ -1.86
HERPUD1-211ENST00000566550 HEXBP07686 556 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms