RNA–Protein interactions for RNA: ENST00000565931.1

RNF40-207, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-207ENST00000565931 AP1M1Q9BXS5 423 aa16.86■□□□□ 0.29
RNF40-207ENST00000565931 OSBPL1AQ9BXW6 950 aa16.86■□□□□ 0.29
RNF40-207ENST00000565931 FAM126AQ9BYI3 521 aaPredicted RBP16.86■□□□□ 0.29
RNF40-207ENST00000565931 TPSD1Q9BZJ3 242 aa16.86■□□□□ 0.29
RNF40-207ENST00000565931 PABPC3Q9H361 631 aaKnown RBP16.86■□□□□ 0.29
RNF40-207ENST00000565931 NOD2Q9HC29 1040 aa16.86■□□□□ 0.29
RNF40-207ENST00000565931 GLOD4Q9HC38 313 aa16.86■□□□□ 0.29
RNF40-207ENST00000565931 SCUBE2Q9NQ36 999 aa16.86■□□□□ 0.29
RNF40-207ENST00000565931 HOMER3Q9NSC5 361 aa16.86■□□□□ 0.29
RNF40-207ENST00000565931 HAUS2Q9NVX0 235 aa16.86■□□□□ 0.29
RNF40-207ENST00000565931 USP36Q9P275 1121 aaKnown RBP16.86■□□□□ 0.29
RNF40-207ENST00000565931 TRHDEQ9UKU6 1024 aa16.86■□□□□ 0.29
RNF40-207ENST00000565931 SCML1Q9UN30 329 aa16.86■□□□□ 0.29
RNF40-207ENST00000565931 DRG1Q9Y295 367 aaKnown RBP16.86■□□□□ 0.29
RNF40-207ENST00000565931 TTLL3Q9Y4R7 772 aa16.86■□□□□ 0.29
RNF40-207ENST00000565931 NUP205Q92621 2012 aa16.86■□□□□ 0.29
RNF40-207ENST00000565931 CUL9Q8IWT3 2517 aa16.85■□□□□ 0.29
RNF40-207ENST00000565931 CFAP69A5D8W1 941 aa16.85■□□□□ 0.29
RNF40-207ENST00000565931 C5orf60A6NFR6 353 aa16.85■□□□□ 0.29
RNF40-207ENST00000565931 KPNA3O00505 521 aaPredicted RBP16.85■□□□□ 0.29
RNF40-207ENST00000565931 ADH1BP00325 375 aa16.85■□□□□ 0.29
RNF40-207ENST00000565931 UGT2B4P06133 528 aa16.85■□□□□ 0.29
RNF40-207ENST00000565931 STIP1P31948 543 aaKnown RBP16.85■□□□□ 0.29
RNF40-207ENST00000565931 CD68P34810 354 aaPredicted RBP16.85■□□□□ 0.29
RNF40-207ENST00000565931 GRM3Q14832 879 aa16.85■□□□□ 0.29
RNF40-207ENST00000565931 CYP1B1Q16678 543 aa16.85■□□□□ 0.29
RNF40-207ENST00000565931 GDPD4Q6W3E5 623 aa16.85■□□□□ 0.29
RNF40-207ENST00000565931 PID1Q7Z2X4 250 aa16.85■□□□□ 0.29
RNF40-207ENST00000565931 CAMK1DQ8IU85 385 aa16.85■□□□□ 0.29
RNF40-207ENST00000565931 AADATQ8N5Z0 425 aa16.85■□□□□ 0.29
RNF40-207ENST00000565931 FAM71DQ8N9W8 422 aa16.85■□□□□ 0.29
RNF40-207ENST00000565931 CD93Q9NPY3 652 aa16.85■□□□□ 0.29
RNF40-207ENST00000565931 KLHL8Q9P2G9 620 aaPredicted RBP16.85■□□□□ 0.29
RNF40-207ENST00000565931 RNF14Q9UBS8 474 aa16.85■□□□□ 0.29
RNF40-207ENST00000565931 ZNF148Q9UQR1 794 aa16.85■□□□□ 0.29
RNF40-207ENST00000565931 ATG2BQ96BY7 2078 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.84■□□□□ 0.29
RNF40-207ENST00000565931 PDE2AO00408 941 aaPredicted RBP16.84■□□□□ 0.29
RNF40-207ENST00000565931 ZNF217O75362 1048 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 PIGNO95427 931 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 IGLV3-19P01714 112 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 ITGAVP06756 1048 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 ACADMP11310 421 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 DRD3P35462 400 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 KCNJ1P48048 391 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 TPMTP51580 245 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 GDF10P55107 478 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 MAP7D1Q3KQU3 841 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 POM121L1PQ3SYA9 428 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 TTC31Q49AM3 519 aaPredicted RBP16.84■□□□□ 0.29
RNF40-207ENST00000565931 ZNF805Q5CZA5 627 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 ANKRD20A2Q5SQ80 823 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 ANKRD20A1Q5TYW2 823 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 ANKRD20A3Q5VUR7 823 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 HDDC3Q8N4P3 179 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 C12orf50Q8NA57 414 aaPredicted RBP16.84■□□□□ 0.29
RNF40-207ENST00000565931 MAGOHBQ96A72 148 aaKnown RBP16.84■□□□□ 0.29
RNF40-207ENST00000565931 RTP4Q96DX8 246 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 ZNF641Q96N77 438 aaPredicted RBP16.84■□□□□ 0.29
RNF40-207ENST00000565931 SPATA13Q96N96 652 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 KLHL32Q96NJ5 620 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 PRRX2Q99811 253 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 SLC25A51Q9H1U9 297 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 SUV39H2Q9H5I1 410 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 ATP13A3Q9H7F0 1226 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 FBXL12Q9NXK8 326 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 SERGEFQ9UGK8 458 aa16.84■□□□□ 0.29
RNF40-207ENST00000565931 A0A1W2PP55 124 aa16.83■□□□□ 0.28
RNF40-207ENST00000565931 PLK4O00444 970 aa16.83■□□□□ 0.28
RNF40-207ENST00000565931 TRAFD1O14545 582 aaPredicted RBP16.83■□□□□ 0.28
RNF40-207ENST00000565931 GCATO75600 419 aa16.83■□□□□ 0.28
RNF40-207ENST00000565931 STK10O94804 968 aaKnown RBP16.83■□□□□ 0.28
RNF40-207ENST00000565931 MMP2P08253 660 aa16.83■□□□□ 0.28
RNF40-207ENST00000565931 NFKB1P19838 968 aa16.83■□□□□ 0.28
RNF40-207ENST00000565931 ITGB7P26010 798 aa16.83■□□□□ 0.28
RNF40-207ENST00000565931 P2RY2P41231 377 aa16.83■□□□□ 0.28
RNF40-207ENST00000565931 PAFAH1B1P43034 410 aa16.83■□□□□ 0.28
RNF40-207ENST00000565931 SKOR1P84550 965 aa16.83■□□□□ 0.28
RNF40-207ENST00000565931 BCL2L1Q07817 233 aa16.83■□□□□ 0.28
RNF40-207ENST00000565931 CNTN1Q12860 1018 aa16.83■□□□□ 0.28
RNF40-207ENST00000565931 SFSWAPQ12872 951 aaKnown RBP16.83■□□□□ 0.28
RNF40-207ENST00000565931 USP39Q53GS9 565 aaKnown RBP16.83■□□□□ 0.28
RNF40-207ENST00000565931 TTC27Q6P3X3 843 aa16.83■□□□□ 0.28
RNF40-207ENST00000565931 USP30Q70CQ3 517 aa16.83■□□□□ 0.28
RNF40-207ENST00000565931 PRPF39Q86UA1 669 aaKnown RBP16.83■□□□□ 0.28
RNF40-207ENST00000565931 KBTBD6Q86V97 674 aa16.83■□□□□ 0.28
RNF40-207ENST00000565931 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.83■□□□□ 0.28
RNF40-207ENST00000565931 ZBTB44Q8NCP5 570 aa16.83■□□□□ 0.28
RNF40-207ENST00000565931 PRSS33Q8NF86 280 aa16.83■□□□□ 0.28
RNF40-207ENST00000565931 CCDC110Q8TBZ0 833 aa16.83■□□□□ 0.28
RNF40-207ENST00000565931 HCAR2Q8TDS4 363 aa16.83■□□□□ 0.28
RNF40-207ENST00000565931 GANCQ8TET4 914 aa16.83■□□□□ 0.28
RNF40-207ENST00000565931 RLN3Q8WXF3 142 aa16.83■□□□□ 0.28
RNF40-207ENST00000565931 ZNF592Q92610 1267 aa16.83■□□□□ 0.28
RNF40-207ENST00000565931 MYO18AQ92614 2054 aaKnown RBP16.83■□□□□ 0.28
RNF40-207ENST00000565931 FAM131CQ96AQ9 280 aa16.83■□□□□ 0.28
RNF40-207ENST00000565931 TADA1Q96BN2 335 aa16.83■□□□□ 0.28
RNF40-207ENST00000565931 ECHDC3Q96DC8 303 aa16.83■□□□□ 0.28
RNF40-207ENST00000565931 IMP4Q96G21 291 aaKnown RBP16.83■□□□□ 0.28
RNF40-207ENST00000565931 PPP1R16AQ96I34 528 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms