RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 TRPM5Q9NZQ8 1165 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MARCH2Q9P0N8 246 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ZFATQ9P243 1243 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TXNDC16Q9P2K2 825 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 NUDT5Q9UKK9 219 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 VANGL2Q9ULK5 521 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ARL2BPQ9Y2Y0 163 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 AAR2Q9Y312 384 aaKnown RBP7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 HS3ST4Q9Y661 456 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 HELZP42694 1942 aaKnown RBP7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SLC12A8A0AV02 714 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ANKRD65E5RJM6 399 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 H0YHG0 523 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 FSBPO95073 299 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 JCHAINP01591 159 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 GSTA1P08263 222 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 NEFHP12036 1026 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CCNB1P14635 433 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 RHOQP17081 205 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CD68P34810 354 aaPredicted RBP7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PGFP49763 221 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 LIG3P49916 1009 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 KPNA1P52294 538 aaPredicted RBP7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 NDST2P52849 883 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CRADDP78560 199 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CDH17Q12864 832 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 BMPR2Q13873 1038 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 LACTB2Q53H82 288 aaPredicted RBP7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 FAM78AQ5JUQ0 283 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PIK3R6Q5UE93 754 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 AFMIDQ63HM1 303 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 KCTD11Q693B1 232 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 POTEHQ6S545 545 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PARM1Q6UWI2 310 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PACS1Q6VY07 963 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TMEM150AQ86TG1 271 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 C10orf67Q8IYJ2 551 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 GBP7Q8N8V2 638 aaPredicted RBP7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PDZD8Q8NEN9 1154 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ACMSDQ8TDX5 336 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 NSMCE1Q8WV22 266 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CCT6BQ92526 530 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 FGF14Q92915 247 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CERS2Q96G23 380 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 BTN2A3PQ96KV6 586 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 C1orf74Q96LT6 269 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ZSWIM3Q96MP5 696 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SRPK1Q96SB4 655 aaKnown RBP7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 IL12RB2Q99665 862 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TBL1YQ9BQ87 522 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 GORASP1Q9BQQ3 440 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TTLL2Q9BWV7 592 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ZYG11BQ9C0D3 744 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 IL22Q9GZX6 179 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SMG9Q9H0W8 520 aaKnown RBP7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 VPS11Q9H270 941 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 RASSF4Q9H2L5 321 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TASP1Q9H6P5 420 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SP110Q9HB58 689 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 GLOD4Q9HC38 313 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SMYD2Q9NRG4 433 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PCMTD2Q9NV79 361 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 OSER1Q9NX31 292 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MOCS1Q9NZB8 636 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 GDE1Q9NZC3 331 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 KLHL14Q9P2G3 628 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SLC17A7Q9P2U7 560 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 EPS15L1Q9UBC2 864 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PPARGC1AQ9UBK2 798 aaKnown RBP7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MUTYHQ9UIF7 546 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PHTF1Q9UMS5 762 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 STARD13Q9Y3M8 1113 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ZFP37Q9Y6Q3 630 aaPredicted RBP7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 NUMBLQ9Y6R0 609 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 RPS6KL1Q9Y6S9 549 aa7.54□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ZZEF1O43149 2961 aa7.53□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TRAV19A0A0A6YYK7 116 aa7.53□□□□□ -1.2
MAP1LC3B-205ENST00000564638 FAM237BA0A1B0GVD1 139 aa7.53□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MAGEB16A2A368 324 aa7.53□□□□□ -1.2
MAP1LC3B-205ENST00000564638 C2orf78A6NCI8 922 aa7.53□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MATN3O15232 486 aa7.53□□□□□ -1.2
MAP1LC3B-205ENST00000564638 GFRA3O60609 400 aa7.53□□□□□ -1.2
MAP1LC3B-205ENST00000564638 UGT1A9O60656 530 aa7.53□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MAFKO60675 156 aa7.53□□□□□ -1.2
MAP1LC3B-205ENST00000564638 EDF1O60869 148 aaKnown RBP7.53□□□□□ -1.2
MAP1LC3B-205ENST00000564638 USP12O75317 370 aa7.53□□□□□ -1.2
MAP1LC3B-205ENST00000564638 USP1O94782 785 aa7.53□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PRAMEF12O95522 483 aa7.53□□□□□ -1.2
MAP1LC3B-205ENST00000564638 IGLV3-27P01718 113 aa7.53□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CKMP06732 381 aa7.53□□□□□ -1.2
MAP1LC3B-205ENST00000564638 DHRS4L1P0CG22 281 aa7.53□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TROVE2P10155 538 aaKnown RBP eCLIP7.53□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MBL2P11226 248 aaPredicted RBP7.53□□□□□ -1.2
MAP1LC3B-205ENST00000564638 DDX6P26196 483 aaKnown RBP eCLIP7.53□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ALDH3A1P30838 453 aa7.53□□□□□ -1.2
MAP1LC3B-205ENST00000564638 AVPR1AP37288 418 aa7.53□□□□□ -1.2
MAP1LC3B-205ENST00000564638 GP5P40197 560 aa7.53□□□□□ -1.2
MAP1LC3B-205ENST00000564638 VIPR2P41587 438 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms