RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 KRIT1O00522 736 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 KCNK3O14649 394 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 SLC31A1O15431 190 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 DAPK3O43293 454 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 CDK4P11802 303 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 ERCC2P18074 760 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 CASP14P31944 242 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 DPYSQ14117 519 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 CYTH1Q15438 398 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 TMCO4Q5TGY1 634 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 KYAT3Q6YP21 454 aaKnown RBP12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 ZNF354CQ86Y25 554 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 ARHGAP12Q8IWW6 846 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 RYBPQ8N488 228 aaPredicted RBP12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 GATA6Q92908 595 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 KLHDC7BQ96G42 594 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 ZNF599Q96NL3 588 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 TUBGCP5Q96RT8 1024 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 DNAJC7Q99615 494 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 C1QTNF2Q9BXJ5 285 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 SLC17A9Q9BYT1 436 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 THAP2Q9H0W7 228 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 KLHL11Q9NVR0 708 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 TOR4AQ9NXH8 423 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 CWC15Q9P013 229 aaKnown RBP12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 RCOR3Q9P2K3 495 aaPredicted RBP12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 MYO1AQ9UBC5 1043 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 LHX3Q9UBR4 397 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 PCDHGA1Q9Y5H4 931 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 CHD5Q8TDI0 1954 aa12.39□□□□□ -0.43
NSMCE1-204ENST00000563273 SSU72P8A0A1W2PR75 194 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 HYAL3O43820 417 aaPredicted RBP12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 UGT2B4P06133 528 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 ITGAVP06756 1048 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 PROS1P07225 676 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 C1SP09871 688 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 PRLRP16471 622 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 IL1R2P27930 398 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 ARL4AP40617 200 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 ABL2P42684 1182 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 PAPOLAP51003 745 aaKnown RBP12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 NSUN2Q08J23 767 aaKnown RBP eCLIP12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 MAPK8IP2Q13387 824 aaPredicted RBP12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 PPP6R3Q5H9R7 873 aaPredicted RBP12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 CCDC122Q5T0U0 273 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 ATXN7L2Q5T6C5 722 aaPredicted RBP12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 SEL1L3Q68CR1 1132 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 UNQ6494/PRO21346Q6UXR6 183 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 GCNT7Q6ZNI0 430 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 KANSL1Q7Z3B3 1105 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 POLNQ7Z5Q5 900 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 SLCO6A1Q86UG4 719 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 KDF1Q8NAX2 398 aaPredicted RBP12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 OR8K1Q8NGG5 319 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 FAM71BQ8TC56 605 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 CPLX3Q8WVH0 158 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 ZNF641Q96N77 438 aaPredicted RBP12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 KLHL32Q96NJ5 620 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 NUP85Q9BW27 656 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 SLC39A8Q9C0K1 460 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 TSPY26PQ9H489 355 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 UVRAGQ9P2Y5 699 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 FTSJ1Q9UET6 329 aa12.38□□□□□ -0.43
NSMCE1-204ENST00000563273 J3KR12 359 aa12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 MYO1FO00160 1098 aa12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 TOR1BO14657 336 aa12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 SPINT1O43278 529 aa12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 TOP3BO95985 862 aaKnown RBP12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 THEGLP0DJG4 465 aa12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 GKP32189 559 aa12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 RABIFP47224 123 aa12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 SLC25A11Q02978 314 aaKnown RBP12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 IL10RBQ08334 325 aa12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 SGCGQ13326 291 aa12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 FGL2Q14314 439 aa12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 SLC18A3Q16572 532 aa12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 ASTE1Q2TB18 679 aaPredicted RBP12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 BRAT1Q6PJG6 821 aa12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 LEKR1Q6ZMV7 388 aa12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 LRRC49Q8IUZ0 686 aa12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 CHCHD4Q8N4Q1 142 aa12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 NPWQ8N729 165 aa12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 OR6K2Q8NGY2 324 aa12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 SPOCK2Q92563 424 aa12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 CELF6Q96J87 481 aaKnown RBP12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 BMFQ96LC9 184 aa12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 KLF6Q99612 283 aaPredicted RBP12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 ANAPC7Q9UJX3 599 aa12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 KLK13Q9UKR3 277 aa12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 ADAMTS9Q9P2N4 1935 aa12.37□□□□□ -0.43
NSMCE1-204ENST00000563273 CFAP69A5D8W1 941 aa12.36□□□□□ -0.43
NSMCE1-204ENST00000563273 IGLON5A6NGN9 336 aa12.36□□□□□ -0.43
NSMCE1-204ENST00000563273 NEMP1O14524 444 aa12.36□□□□□ -0.43
NSMCE1-204ENST00000563273 PALMO75781 387 aa12.36□□□□□ -0.43
NSMCE1-204ENST00000563273 PAK4O96013 591 aaPredicted RBP12.36□□□□□ -0.43
NSMCE1-204ENST00000563273 TPM1P09493 284 aa12.36□□□□□ -0.43
NSMCE1-204ENST00000563273 H2AFZP0C0S5 128 aa12.36□□□□□ -0.43
NSMCE1-204ENST00000563273 ATXN1LP0C7T5 689 aaKnown RBP12.36□□□□□ -0.43
NSMCE1-204ENST00000563273 RARAP10276 462 aa12.36□□□□□ -0.43
NSMCE1-204ENST00000563273 TIMP2P16035 220 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms