RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 RNMTO43148 476 aaKnown RBP3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 PTP4A3O75365 173 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 TMCC1O94876 653 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 SERPINC1P01008 464 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 URODP06132 367 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 FGF2P09038 288 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 TSPY3P0CV98 308 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 TSPY8P0CW00 308 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 HSPA1AP0DMV8 641 aaKnown RBP3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 HSPA1BP0DMV9 641 aaKnown RBP3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 SNHG28P0DPA3 235 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 CYP19A1P11511 503 aaPredicted RBP3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 AKR1B1P15121 316 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 CHMP24386 653 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 NFKBIAP25963 317 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 EPHA8P29322 1005 aaPredicted RBP3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 ARL3P36405 182 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 SKIV2L2P42285 1042 aaKnown RBP3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 RAD52P43351 418 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 PTPN9P43378 593 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 CTCFP49711 727 aaPredicted RBP3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 CLCNKBP51801 687 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 SNX16P57768 344 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 TSPY1Q01534 308 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 NEXNQ0ZGT2 675 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 MED22Q15528 200 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 INPP5JQ15735 1006 aaPredicted RBP3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 PRICKLE4Q2TBC4 344 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 FBXO43Q4G163 708 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 RILPL1Q5EBL4 403 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 ZNF766Q5HY98 468 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 TMEM268Q5VZI3 342 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 CRELD2Q6UXH1 353 aaPredicted RBP3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 IRF2BP2Q7Z5L9 587 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 PXKQ7Z7A4 578 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 TRIM74Q86UV6 250 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 TRIM73Q86UV7 250 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 WDR5BQ86VZ2 330 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 SAMD14Q8IZD0 417 aaPredicted RBP3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 FAM185AQ8N0U4 392 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 NGEFQ8N5V2 710 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 NRACQ8N912 160 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 TNIP2Q8NFZ5 429 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 ZCCHC10Q8TBK6 192 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 ADAMTS15Q8TE58 950 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 WASF1Q92558 559 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 CNOT9Q92600 299 aaKnown RBP3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 PIP5K1AQ99755 562 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 TASP1Q9H6P5 420 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 AAMDCQ9H7C9 122 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 PNRC2Q9NPJ4 139 aaKnown RBP3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 SEMA4BQ9NPR2 832 aaPredicted RBP3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 SMYD2Q9NRG4 433 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 ATP8A2Q9NTI2 1148 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 ANKEF1Q9NU02 776 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 BEX4Q9NWD9 120 aaPredicted RBP3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 HCN3Q9P1Z3 774 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 CTNNAL1Q9UBT7 734 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 SLC25A10Q9UBX3 287 aaPredicted RBP3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 SARDHQ9UL12 918 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 ZNF215Q9UL58 517 aaPredicted RBP3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 HS3ST3B1Q9Y662 390 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 SLC4A4Q9Y6R1 1079 aa3.46□□□□□ -1.86
SHCBP1-202ENST00000563219 TEX13CA0A0J9YWL9 993 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 C17orf113A0A1B0GUU1 675 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 A0A1W2PPC1 479 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 A6NNC1 897 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 B4DLN1 442 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 MDM4O15151 490 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 KIF1CO43896 1103 aaKnown RBP3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 TMCC2O75069 709 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 EPN2O95208 641 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 STARD3NLO95772 234 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 ADAP00813 363 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 IFNA2P01563 188 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 KLKB1P03952 638 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 TMEM191BP0C7N4 346 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 MYZAPP0CAP1 466 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 CHRNB1P11230 501 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 UNGP13051 313 aaPredicted RBP3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 TKTP29401 623 aaKnown RBP3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 CCKBRP32239 447 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 ICAM3P32942 547 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 MLH1P40692 756 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 HADHAP40939 763 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 ME1P48163 572 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 CLNS1AP54105 237 aaKnown RBP3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 UFM1P61960 85 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 CAMK1Q14012 370 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 SYTL3Q4VX76 610 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 SLC9B1Q4ZJI4 515 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 ZNF667Q5HYK9 610 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 ARMC3Q5W041 872 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 C17orf99Q6UX52 265 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 IKBIPQ70UQ0 350 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 GALNT5Q7Z7M9 940 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 ZDHHC17Q8IUH5 632 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 ZDHHC23Q8IYP9 409 aa3.45□□□□□ -1.86
SHCBP1-202ENST00000563219 MMP21Q8N119 569 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms