RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 KAT7O95251 611 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 CYP2D6P10635 497 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 TFEBP19484 476 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 PRPH2P23942 346 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 LMO1P25800 156 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 SKIV2L2P42285 1042 aaKnown RBP4.02□□□□□ -1.77
HERC1-215ENST00000561436 MMP14P50281 582 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 ZNF84P51523 738 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 ADPRHP54922 357 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 SLC12A2P55011 1212 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 NAP1L1P55209 391 aaKnown RBP4.02□□□□□ -1.77
HERC1-215ENST00000561436 TUBA4AP68366 448 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 ARHGAP8P85298 464 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 GALNT2Q10471 571 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 TEFQ10587 303 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 MTA1Q13330 715 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 BYSLQ13895 437 aaKnown RBP4.02□□□□□ -1.77
HERC1-215ENST00000561436 ZNF268Q14587 947 aaPredicted RBP4.02□□□□□ -1.77
HERC1-215ENST00000561436 NAA25Q14CX7 972 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 TNIP1Q15025 636 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 CEP78Q5JTW2 689 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 ACAD10Q6JQN1 1059 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 AADACL2Q6P093 401 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 SLC22A25Q6T423 547 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 KIAA1324Q6UXG2 1013 aaKnown RBP4.02□□□□□ -1.77
HERC1-215ENST00000561436 C4orf50Q6ZRC1 276 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 TMEM200AQ86VY9 491 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 CHSY1Q86X52 802 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 NBPF5PQ86XG9 351 aaPredicted RBP4.02□□□□□ -1.77
HERC1-215ENST00000561436 KLBQ86Z14 1044 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 ZUFSPQ96AP4 578 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 RNF125Q96EQ8 232 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 RRP36Q96EU6 259 aaKnown RBP4.02□□□□□ -1.77
HERC1-215ENST00000561436 QTRT1Q9BXR0 403 aaKnown RBP4.02□□□□□ -1.77
HERC1-215ENST00000561436 CADM1Q9BY67 442 aaKnown RBP4.02□□□□□ -1.77
HERC1-215ENST00000561436 INTS2Q9H0H0 1204 aaKnown RBP4.02□□□□□ -1.77
HERC1-215ENST00000561436 MROH8Q9H579 483 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 PDGFCQ9NRA1 345 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 ARL15Q9NXU5 204 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 RNF7Q9UBF6 113 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 CD207Q9UJ71 328 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 DHDHQ9UQ10 334 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 PKP3Q9Y446 797 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 ZNF831Q5JPB2 1677 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 WNK3Q9BYP7 1800 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 AKAP12Q02952 1782 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 IBTKQ9P2D0 1353 aaPredicted RBP4.02□□□□□ -1.77
HERC1-215ENST00000561436 HEG1Q9ULI3 1381 aa4.02□□□□□ -1.77
HERC1-215ENST00000561436 MON2Q7Z3U7 1717 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 RNF123Q5XPI4 1314 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.01□□□□□ -1.77
HERC1-215ENST00000561436 GOLGA6L10A0A0M3HER8 536 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 DPPA5A6NC42 116 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 B4E171 279 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 KIF1CO43896 1103 aaKnown RBP4.01□□□□□ -1.77
HERC1-215ENST00000561436 DHX16O60231 1041 aaKnown RBP4.01□□□□□ -1.77
HERC1-215ENST00000561436 BBOX1O75936 387 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 PRKCGP05129 697 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 RFPL3SP0C7P2 107 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 ATF7P17544 494 aaPredicted RBP4.01□□□□□ -1.77
HERC1-215ENST00000561436 TSPAN7P41732 249 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 ARHGAP25P42331 645 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 HSF1Q00613 529 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 SLC10A2Q12908 348 aaPredicted RBP4.01□□□□□ -1.77
HERC1-215ENST00000561436 GALNT3Q14435 633 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 SUPT20HL1Q3ZLR7 823 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 HYIQ5T013 277 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 CST9Q5W186 159 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 SLC2A7Q6PXP3 512 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 LRIG3Q6UXM1 1119 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 RRM2BQ7LG56 351 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 RFX6Q8HWS3 928 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 RHPN2Q8IUC4 686 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 BRSK2Q8IWQ3 736 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 SRRM1Q8IYB3 904 aaKnown RBP4.01□□□□□ -1.77
HERC1-215ENST00000561436 OSR1Q8TAX0 266 aaPredicted RBP4.01□□□□□ -1.77
HERC1-215ENST00000561436 TBC1D22AQ8WUA7 517 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 ZFPM2Q8WW38 1151 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 RFFLQ8WZ73 363 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 ATP2A3Q93084 1043 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 RNFT2Q96EX2 444 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 P2RY11Q96G91 374 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 APOPT1Q96IL0 206 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 RITA1Q96K30 269 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 ADAD1Q96M93 576 aaKnown RBP4.01□□□□□ -1.77
HERC1-215ENST00000561436 FCRL5Q96RD9 977 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 HERC2P3Q9BVR0 1158 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 IFT27Q9BW83 186 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 TTC12Q9H892 705 aaPredicted RBP4.01□□□□□ -1.77
HERC1-215ENST00000561436 PANK3Q9H999 370 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 SLC22A11Q9NSA0 550 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 OLA1Q9NTK5 396 aaKnown RBP4.01□□□□□ -1.77
HERC1-215ENST00000561436 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.01□□□□□ -1.77
HERC1-215ENST00000561436 BEX4Q9NWD9 120 aaPredicted RBP4.01□□□□□ -1.77
HERC1-215ENST00000561436 LAS1LQ9Y4W2 734 aaKnown RBP4.01□□□□□ -1.77
HERC1-215ENST00000561436 CYP46A1Q9Y6A2 500 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 NPC1L1Q9UHC9 1359 aa4.01□□□□□ -1.77
HERC1-215ENST00000561436 GAGE10A6NGK3 116 aa4□□□□□ -1.77
HERC1-215ENST00000561436 TNPO2O14787 897 aaKnown RBP4□□□□□ -1.77
HERC1-215ENST00000561436 MSI1O43347 362 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms