RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 NOMO1Q15155 1222 aa12.42□□□□□ -0.42
RCCD1-209ENST00000557750 STPG1Q5TH74 334 aa12.42□□□□□ -0.42
RCCD1-209ENST00000557750 ZNF776Q68DI1 518 aaPredicted RBP12.42□□□□□ -0.42
RCCD1-209ENST00000557750 KBTBD6Q86V97 674 aa12.42□□□□□ -0.42
RCCD1-209ENST00000557750 SLC13A5Q86YT5 568 aaPredicted RBP12.42□□□□□ -0.42
RCCD1-209ENST00000557750 CHST14Q8NCH0 376 aa12.42□□□□□ -0.42
RCCD1-209ENST00000557750 GRIN3AQ8TCU5 1115 aa12.42□□□□□ -0.42
RCCD1-209ENST00000557750 LOXL4Q96JB6 756 aa12.42□□□□□ -0.42
RCCD1-209ENST00000557750 WDR24Q96S15 920 aa12.42□□□□□ -0.42
RCCD1-209ENST00000557750 BRD8Q9H0E9 1235 aa12.42□□□□□ -0.42
RCCD1-209ENST00000557750 RSPH9Q9H1X1 276 aaPredicted RBP12.42□□□□□ -0.42
RCCD1-209ENST00000557750 ZDHHC6Q9H6R6 413 aa12.42□□□□□ -0.42
RCCD1-209ENST00000557750 SEPT10Q9P0V9 454 aa12.42□□□□□ -0.42
RCCD1-209ENST00000557750 LHX3Q9UBR4 397 aa12.42□□□□□ -0.42
RCCD1-209ENST00000557750 EBF1Q9UH73 591 aa12.42□□□□□ -0.42
RCCD1-209ENST00000557750 IL36AQ9UHA7 158 aa12.42□□□□□ -0.42
RCCD1-209ENST00000557750 ATG2BQ96BY7 2078 aa12.41□□□□□ -0.42
RCCD1-209ENST00000557750 TCRBV7S2A1N4TA0A589 114 aa12.41□□□□□ -0.42
RCCD1-209ENST00000557750 C1QTNF3-AMACRE9PGA6 284 aa12.41□□□□□ -0.42
RCCD1-209ENST00000557750 H7C0C1 242 aa12.41□□□□□ -0.42
RCCD1-209ENST00000557750 KRIT1O00522 736 aa12.41□□□□□ -0.42
RCCD1-209ENST00000557750 ALOX15BO15296 676 aa12.41□□□□□ -0.42
RCCD1-209ENST00000557750 CTIFO43310 598 aaKnown RBP12.41□□□□□ -0.42
RCCD1-209ENST00000557750 FGGP02679 453 aa12.41□□□□□ -0.42
RCCD1-209ENST00000557750 CCNB1P14635 433 aa12.41□□□□□ -0.42
RCCD1-209ENST00000557750 GKP32189 559 aa12.41□□□□□ -0.42
RCCD1-209ENST00000557750 CHRNA3P32297 505 aa12.41□□□□□ -0.42
RCCD1-209ENST00000557750 ATP5OP48047 213 aa12.41□□□□□ -0.42
RCCD1-209ENST00000557750 EIF3EP60228 445 aaKnown RBP12.41□□□□□ -0.42
RCCD1-209ENST00000557750 RPS14P62263 151 aaKnown RBP12.41□□□□□ -0.42
RCCD1-209ENST00000557750 ZNF33AQ06730 810 aa12.41□□□□□ -0.42
RCCD1-209ENST00000557750 CST6Q15828 149 aa12.41□□□□□ -0.42
RCCD1-209ENST00000557750 PLPP6Q8IY26 295 aa12.41□□□□□ -0.42
RCCD1-209ENST00000557750 TTC13Q8NBP0 860 aa12.41□□□□□ -0.42
RCCD1-209ENST00000557750 MAML1Q92585 1016 aa12.41□□□□□ -0.42
RCCD1-209ENST00000557750 PSKH2Q96QS6 385 aa12.41□□□□□ -0.42
RCCD1-209ENST00000557750 FAM129BQ96TA1 746 aa12.41□□□□□ -0.42
RCCD1-209ENST00000557750 NAPGQ99747 312 aaPredicted RBP12.41□□□□□ -0.42
RCCD1-209ENST00000557750 HEPHQ9BQS7 1158 aa12.41□□□□□ -0.42
RCCD1-209ENST00000557750 SMOC1Q9H4F8 434 aa12.41□□□□□ -0.42
RCCD1-209ENST00000557750 NT5MQ9NPB1 228 aa12.41□□□□□ -0.42
RCCD1-209ENST00000557750 HAUS2Q9NVX0 235 aa12.41□□□□□ -0.42
RCCD1-209ENST00000557750 RBM22Q9NW64 420 aaKnown RBP eCLIP12.41□□□□□ -0.42
RCCD1-209ENST00000557750 OGFRQ9NZT2 677 aa12.41□□□□□ -0.42
RCCD1-209ENST00000557750 EVLQ9UI08 416 aaPredicted RBP12.41□□□□□ -0.42
RCCD1-209ENST00000557750 RALYQ9UKM9 306 aaKnown RBP12.41□□□□□ -0.42
RCCD1-209ENST00000557750 ZZEF1O43149 2961 aa12.41□□□□□ -0.42
RCCD1-209ENST00000557750 HACD1B0YJ81 288 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 MUSKO15146 869 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 POP4O95707 220 aaKnown RBP12.4□□□□□ -0.42
RCCD1-209ENST00000557750 JCHAINP01591 159 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 PRNPP04156 253 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 CTSLP07711 333 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 HSPA9P38646 679 aaKnown RBP12.4□□□□□ -0.42
RCCD1-209ENST00000557750 RGRP47804 291 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 SCNN1BP51168 640 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 MAXP61244 160 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 SHC2P98077 582 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 ZBTB16Q05516 673 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 RAD51Q06609 339 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 ITKQ08881 620 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 XRCC4Q13426 336 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 PRKD1Q15139 912 aaPredicted RBP12.4□□□□□ -0.42
RCCD1-209ENST00000557750 LONRF2Q1L5Z9 754 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 MYLK3Q32MK0 819 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 POM121L1PQ3SYA9 428 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 TTC31Q49AM3 519 aaPredicted RBP12.4□□□□□ -0.42
RCCD1-209ENST00000557750 ARSIQ5FYB1 569 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 PLA2G2CQ5R387 149 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 FAM46CQ5VWP2 391 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 PIP4K2CQ8TBX8 421 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 GANCQ8TET4 914 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 FATE1Q969F0 183 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 PBKQ96KB5 322 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 QKIQ96PU8 341 aaKnown RBP eCLIP12.4□□□□□ -0.42
RCCD1-209ENST00000557750 OSBPL9Q96SU4 736 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 FERMT1Q9BQL6 677 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 CEP41Q9BYV8 373 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 SARDHQ9UL12 918 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 PPM1HQ9ULR3 514 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 SNX12Q9UMY4 172 aa12.4□□□□□ -0.42
RCCD1-209ENST00000557750 CCDC163A0A0D9SF12 145 aa12.39□□□□□ -0.43
RCCD1-209ENST00000557750 CTAGE9A4FU28 777 aa12.39□□□□□ -0.43
RCCD1-209ENST00000557750 KPNA3O00505 521 aaPredicted RBP12.39□□□□□ -0.43
RCCD1-209ENST00000557750 MID1O15344 667 aa12.39□□□□□ -0.43
RCCD1-209ENST00000557750 ZNF217O75362 1048 aa12.39□□□□□ -0.43
RCCD1-209ENST00000557750 LEFTY1O75610 366 aa12.39□□□□□ -0.43
RCCD1-209ENST00000557750 ADH1BP00325 375 aa12.39□□□□□ -0.43
RCCD1-209ENST00000557750 RBP3P10745 1247 aa12.39□□□□□ -0.43
RCCD1-209ENST00000557750 SLC8A1P32418 973 aa12.39□□□□□ -0.43
RCCD1-209ENST00000557750 NSUN2Q08J23 767 aaKnown RBP eCLIP12.39□□□□□ -0.43
RCCD1-209ENST00000557750 ZBTB17Q13105 803 aa12.39□□□□□ -0.43
RCCD1-209ENST00000557750 USP39Q53GS9 565 aaKnown RBP12.39□□□□□ -0.43
RCCD1-209ENST00000557750 SLC45A4Q5BKX6 768 aa12.39□□□□□ -0.43
RCCD1-209ENST00000557750 DARS2Q6PI48 645 aaKnown RBP12.39□□□□□ -0.43
RCCD1-209ENST00000557750 CDKL3Q8IVW4 592 aaPredicted RBP12.39□□□□□ -0.43
RCCD1-209ENST00000557750 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.39□□□□□ -0.43
RCCD1-209ENST00000557750 TEX26Q8N6G2 289 aa12.39□□□□□ -0.43
RCCD1-209ENST00000557750 RLN3Q8WXF3 142 aa12.39□□□□□ -0.43
RCCD1-209ENST00000557750 ZNF419Q96HQ0 510 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms