RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 NUDT5Q9UKK9 219 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 FAM50BQ9Y247 325 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 SQORQ9Y6N5 450 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 NUP98P52948 1817 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 ZNF197O14709 1029 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 CHRNGP07510 517 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 SERPINF2P08697 491 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 BDNFP23560 247 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 RUNX1T1Q06455 604 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 ARMC3Q5W041 872 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 ATG16L2Q8NAA4 619 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 GPR20Q99678 358 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 ZSCAN9O15535 394 aaPredicted RBP15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 ADRA1BP35368 520 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 CPT1AP50416 773 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 NADK2Q4G0N4 442 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 CHADLQ6NUI6 762 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 OR52K2Q8NGK3 314 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 UNC93B1Q9H1C4 597 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 GPBP1L1Q9HC44 474 aaPredicted RBP15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 PRKAG2Q9UGJ0 569 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 CRLS1Q9UJA2 301 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 F5H5T6 163 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 BUD23O43709 281 aaKnown RBP15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 T-ENOLP0DO92 83 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 ADSLP30566 484 aaPredicted RBP15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 FMO4P31512 558 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 ADCYAP1R1P41586 468 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 ABL2P42684 1182 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 HARS2P49590 506 aaKnown RBP15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 CCNG1P51959 295 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 THOP1P52888 689 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 PKN3Q6P5Z2 889 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 TMEM26Q6ZUK4 368 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 CLYBLQ8N0X4 340 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 OR2T34Q8NGX1 318 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 OR2T3Q8NH03 318 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 FBXO30Q8TB52 745 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 IMPAD1Q9NX62 359 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 TUBGCP4Q9UGJ1 667 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 PRG3Q9Y2Y8 225 aaPredicted RBP15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 RAMP2O60895 175 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 HOXB8P17481 243 aaPredicted RBP15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 PRKCHP24723 683 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 SCNN1BP51168 640 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 TRIM25Q14258 630 aaKnown RBP15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 CCDC85BQ15834 202 aaPredicted RBP15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 PGS1Q32NB8 556 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 GLB1LQ6UWU2 654 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 PHTF2Q8N3S3 785 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 C18orf25Q96B23 403 aaPredicted RBP15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 DUSP16Q9BY84 665 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 SIRPGQ9P1W8 387 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 A0A0J9YYE9 177 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 AMHP03971 560 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 AXLP30530 894 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 CD86P42081 329 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 CDK18Q07002 472 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 CSTF3Q12996 717 aaKnown RBP15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 PPM1LQ5SGD2 360 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 POTEHQ6S545 545 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 SPPL2CQ8IUH8 684 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 BORCS5Q969J3 196 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 FBXO32Q969P5 355 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 TWNKQ96RR1 684 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 COQ10BQ9H8M1 238 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 FADS3Q9Y5Q0 445 aa15.15■□□□□ 0.02
ARHGEF40-207ENST00000556399 IRF1P10914 325 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 TKTP29401 623 aaKnown RBP15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 DGUOKQ16854 277 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 TTC23Q5W5X9 447 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 FAM45BPQ6NSW5 357 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 CDHR3Q6ZTQ4 885 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 FAM45AQ8TCE6 357 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 TBCDQ9BTW9 1192 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 RAD21L1Q9H4I0 556 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 LEF1Q9UJU2 399 aaPredicted RBP15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 PPP2R3BQ9Y5P8 575 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 FAM20BO75063 409 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 XRCC1P18887 633 aaPredicted RBP15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 CYP2B6P20813 491 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 IRF9Q00978 393 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 TMEM198Q66K66 360 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 REP15Q6BDI9 236 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 OTOP3Q7RTS5 596 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 STAG3L4Q8TBR4 150 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 UTP4Q969X6 686 aaKnown RBP15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 OR52B2Q96RD2 323 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 STRA6Q9BX79 667 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 SCUBE2Q9NQ36 999 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 EIF2B3Q9NR50 452 aaKnown RBP15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 CCL15-CCL14A0A0B4J2E2 113 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 SLC12A8A0AV02 714 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 A6NHS1 94 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 AZIN1O14977 448 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 FGF10O15520 208 aaPredicted RBP15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 TSPAN3O60637 253 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 MSCO60682 206 aa15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 IPO13O94829 963 aaKnown RBP15.14■□□□□ 0.01
ARHGEF40-207ENST00000556399 L1CAMP32004 1257 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms