RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 EXOC2Q96KP1 924 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 ZNF599Q96NL3 588 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 PANX2Q96RD6 677 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 CINPQ9BW66 212 aaPredicted RBP11.69□□□□□ -0.54
SLIRP-206ENST00000556375 CPEB1Q9BZB8 566 aaKnown RBP11.69□□□□□ -0.54
SLIRP-206ENST00000556375 GAREM1Q9H706 876 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 AASDHPPTQ9NRN7 309 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 ANKRD6Q9Y2G4 727 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 FADS3Q9Y5Q0 445 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 PCNX2A6NKB5 2137 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 A0A1W2PR77 199 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 MED19A0JLT2 244 aaPredicted RBP11.68□□□□□ -0.54
SLIRP-206ENST00000556375 C16orf96A6NNT2 1141 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 TMEM110-MUSTN1A8MSY1 372 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 PRAMEF26H0Y7S4 382 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 PALMO75781 387 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 KCNK5O95279 499 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 WNT1P04628 370 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 CD48P09326 243 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 IL4RP24394 825 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 CYLC1P35663 651 aaPredicted RBP11.68□□□□□ -0.54
SLIRP-206ENST00000556375 ABL2P42684 1182 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 CTSKP43235 329 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 NOVA1P51513 510 aaKnown RBP11.68□□□□□ -0.54
SLIRP-206ENST00000556375 C21orf59P57076 290 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 GRM3Q14832 879 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 ZNF284Q2VY69 593 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 HLA-BQ31612 363 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 ATP13A4Q4VNC1 1196 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 TMEM259Q4ZIN3 620 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 SLC45A4Q5BKX6 768 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 KIAA1161Q6NSJ0 714 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 GDPD4Q6W3E5 623 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 PIP4P1Q86T03 277 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 MAP7D3Q8IWC1 876 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 TP53INP2Q8IXH6 220 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 FAF2Q96CS3 445 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 KLHL32Q96NJ5 620 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 ANP32EQ9BTT0 268 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 CALN1Q9BXU9 219 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 LUC7LQ9NQ29 371 aaKnown RBP11.68□□□□□ -0.54
SLIRP-206ENST00000556375 KLHL11Q9NVR0 708 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 DKK3Q9UBP4 350 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 SEPT3Q9UH03 358 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 FNDC3AQ9Y2H6 1198 aaKnown RBP11.68□□□□□ -0.54
SLIRP-206ENST00000556375 SNX11Q9Y5W9 270 aa11.68□□□□□ -0.54
SLIRP-206ENST00000556375 LRRK1Q38SD2 2015 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 TSPAN11A1L157 253 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 WNT9AO14904 365 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 INSIG1O15503 277 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 SPINT1O43278 529 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 TSPAN6O43657 245 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 MFSD11O43934 449 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 PCDH8O95206 1070 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 CEACAM1P13688 526 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 CD59P13987 128 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 KCNA4P22459 653 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 MAGEA1P43355 309 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 RGRP47804 291 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 CSNK1DP48730 415 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 HADHBP55084 474 aaKnown RBP11.67□□□□□ -0.54
SLIRP-206ENST00000556375 RPS21P63220 83 aaKnown RBP11.67□□□□□ -0.54
SLIRP-206ENST00000556375 OVGP1Q12889 678 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 MMRN1Q13201 1228 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 LBRQ14739 615 aaKnown RBP11.67□□□□□ -0.54
SLIRP-206ENST00000556375 PAFAH1B3Q15102 231 aaKnown RBP11.67□□□□□ -0.54
SLIRP-206ENST00000556375 SPA17Q15506 151 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 ZNF423Q2M1K9 1284 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 SEL1L3Q68CR1 1132 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 NCBP2-AS2Q69YL0 99 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 PSAPL1Q6NUJ1 521 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 IQCHQ86VS3 1027 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 VSIG1Q86XK7 387 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 LRRC49Q8IUZ0 686 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 MFSD2AQ8NA29 543 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 TMEM145Q8NBT3 493 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 KCTD6Q8NC69 237 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 TSEN2Q8NCE0 465 aaKnown RBP11.67□□□□□ -0.54
SLIRP-206ENST00000556375 DEFB124Q8NES8 71 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 PCDH19Q8TAB3 1148 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 PSKH2Q96QS6 385 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 TUBGCP5Q96RT8 1024 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 SLC32A1Q9H598 525 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 IL21RQ9HBE5 538 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 ZFR2Q9UPR6 939 aaKnown RBP11.67□□□□□ -0.54
SLIRP-206ENST00000556375 PCDHGB2Q9Y5G2 931 aa11.67□□□□□ -0.54
SLIRP-206ENST00000556375 CEP295Q9C0D2 2601 aa11.66□□□□□ -0.54
SLIRP-206ENST00000556375 ZNF487B1APH4 448 aa11.66□□□□□ -0.54
SLIRP-206ENST00000556375 AREL1O15033 823 aa11.66□□□□□ -0.54
SLIRP-206ENST00000556375 SLC31A1O15431 190 aa11.66□□□□□ -0.54
SLIRP-206ENST00000556375 DFNA5O60443 496 aa11.66□□□□□ -0.54
SLIRP-206ENST00000556375 MAFKO60675 156 aa11.66□□□□□ -0.54
SLIRP-206ENST00000556375 MAGEC1O60732 1142 aa11.66□□□□□ -0.54
SLIRP-206ENST00000556375 PIGNO95427 931 aa11.66□□□□□ -0.54
SLIRP-206ENST00000556375 PEX11BO96011 259 aa11.66□□□□□ -0.54
SLIRP-206ENST00000556375 ADRB1P08588 477 aa11.66□□□□□ -0.54
SLIRP-206ENST00000556375 PRLRP16471 622 aa11.66□□□□□ -0.54
SLIRP-206ENST00000556375 HNRNPA2B1P22626 353 aaKnown RBP11.66□□□□□ -0.54
SLIRP-206ENST00000556375 SERPINA4P29622 427 aa11.66□□□□□ -0.54
SLIRP-206ENST00000556375 CDC25BP30305 580 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms