RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 MYLPFQ96A32 169 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 MFSD14AQ96MC6 490 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 GAD1Q99259 594 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 TTLL2Q9BWV7 592 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 DUSP16Q9BY84 665 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 MYLK2Q9H1R3 596 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 CXorf56Q9H5V9 222 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 ACSS3Q9H6R3 686 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 ATP6V1HQ9UI12 483 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 GGT7Q9UJ14 662 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 TRIM17Q9Y577 477 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 ANKRD65E5RJM6 399 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 FSCN2O14926 492 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 PER2O15055 1255 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 INPP4BO15327 924 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 RPA3P35244 121 aaPredicted RBP10.82□□□□□ -0.68
ACTN1-216ENST00000556083 RAB10P61026 200 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 PACS1Q6VY07 963 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 NATD1Q8N6N6 113 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 OR6Y1Q8NGX8 325 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 RASSF5Q8WWW0 418 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 POP1Q99575 1024 aaKnown RBP10.82□□□□□ -0.68
ACTN1-216ENST00000556083 COPS8Q99627 209 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 HOPXQ9BPY8 73 aaPredicted RBP10.82□□□□□ -0.68
ACTN1-216ENST00000556083 POMKQ9H5K3 350 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 AASDHPPTQ9NRN7 309 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 SEMA3GQ9NS98 782 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 VPS4AQ9UN37 437 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 EFCAB10A6NFE3 127 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 C5orf60A6NFR6 353 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 TMEM191CA6NGB0 347 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 LIASO43766 372 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 FGRP09769 529 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 SMIM10L2AP0DMW4 78 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 SMIM10L2BP0DMW5 78 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 AMD1P17707 334 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 TPSB2P20231 275 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 BDNFP23560 247 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 RPS6KA3P51812 740 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 PTP4A2Q12974 167 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 NAA30Q147X3 362 aaPredicted RBP10.82□□□□□ -0.68
ACTN1-216ENST00000556083 TPSAB1Q15661 275 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 NDUFA9Q16795 377 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 DUSP28Q4G0W2 176 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 METTL21CQ5VZV1 264 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 FBXW10Q5XX13 1052 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 SPATA19Q7Z5L4 167 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 ARHGEF19Q8IW93 802 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 UTP15Q8TED0 518 aaKnown RBP10.82□□□□□ -0.68
ACTN1-216ENST00000556083 FIG4Q92562 907 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 BTN2A3PQ96KV6 586 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 EBNA1BP2Q99848 306 aaKnown RBP10.82□□□□□ -0.68
ACTN1-216ENST00000556083 ROGDIQ9GZN7 287 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 CDT1Q9H211 546 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 KLHL31Q9H511 634 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 CLN6Q9NWW5 311 aa10.82□□□□□ -0.68
ACTN1-216ENST00000556083 BCL9LQ86UU0 1499 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 RGSL1A5PLK6 1076 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 SYN3O14994 580 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 GRM6O15303 877 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 SLC35G4P0C7Q5 338 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 GPR1P46091 355 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 MRPS5P82675 430 aaKnown RBP10.81□□□□□ -0.68
ACTN1-216ENST00000556083 UBE3AQ05086 875 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 CDK18Q07002 472 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 RIPPLY1Q0D2K3 151 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 TRAF3Q13114 568 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 IL27RAQ6UWB1 636 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 IZUMO2Q6UXV1 221 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 CHSY3Q70JA7 882 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 CPA6Q8N4T0 437 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 APOL2Q9BQE5 337 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 GPR88Q9GZN0 384 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 POLR1BQ9H9Y6 1135 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 PHPT1Q9NRX4 125 aaPredicted RBP10.81□□□□□ -0.68
ACTN1-216ENST00000556083 FNIP2Q9P278 1114 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 GRIN2DO15399 1336 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 NFATC1O95644 943 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 UBTFL6P0CB48 400 aaPredicted RBP10.81□□□□□ -0.68
ACTN1-216ENST00000556083 BMP7P18075 431 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 PTX3P26022 381 aaPredicted RBP10.81□□□□□ -0.68
ACTN1-216ENST00000556083 RBL1P28749 1068 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 PSMC6P62333 389 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 MAPKAPK3Q16644 382 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 AP5B1Q2VPB7 878 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 ZNF618Q5T7W0 954 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 KRT77Q7Z794 578 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 DEFB128Q7Z7B8 93 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 ELMO1Q92556 727 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 ITCHQ96J02 903 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 TCF12Q99081 682 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 MFSD1Q9H3U5 465 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 SPAG4Q9NPE6 437 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 SNX8Q9Y5X2 465 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 H3BN98 237 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 TRIM38O00635 465 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 UBOX5O94941 541 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 PIGNO95427 931 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 IFNGP01579 166 aa10.81□□□□□ -0.68
ACTN1-216ENST00000556083 ENO2P09104 434 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms