RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 VOPP1Q96AW1 172 aa19.28■□□□□ 0.68
SUPT16H-203ENST00000555752 GSDMAQ96QA5 445 aa19.28■□□□□ 0.68
SUPT16H-203ENST00000555752 GFM1Q96RP9 751 aaKnown RBP19.28■□□□□ 0.68
SUPT16H-203ENST00000555752 SLC13A1Q9BZW2 595 aa19.28■□□□□ 0.68
SUPT16H-203ENST00000555752 WDCPQ9H6R7 721 aa19.28■□□□□ 0.68
SUPT16H-203ENST00000555752 MBNL1Q9NR56 388 aaKnown RBP19.28■□□□□ 0.68
SUPT16H-203ENST00000555752 ACSL6Q9UKU0 697 aa19.28■□□□□ 0.68
SUPT16H-203ENST00000555752 DOCK4Q8N1I0 1966 aa19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 PRAMEF33A0A0G2JMD5 474 aa19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 FAM170AA1A519 330 aa19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 TSPAN6O43657 245 aa19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 PRAMEF10O60809 474 aa19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 CD160O95971 181 aa19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 LIPCP11150 499 aa19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 EIF4A3P38919 411 aaKnown RBP19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 USP8P40818 1118 aa19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 CXCR3P49682 368 aa19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 INHBCP55103 352 aa19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 APBA1Q02410 837 aa19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 TLE1Q04724 770 aa19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 CLCA4Q14CN2 919 aa19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 XKR5Q6UX68 686 aa19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 ZFAND4Q86XD8 727 aa19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 FMR1NBQ8N0W7 255 aaPredicted RBP19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 ARL10Q8N8L6 244 aa19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 C1orf131Q8NDD1 294 aaKnown RBP19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 DENND6BQ8NEG7 585 aa19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 HTR3CQ8WXA8 447 aa19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 NPY6RQ99463 290 aa19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 CPEB1Q9BZB8 566 aaKnown RBP19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 CEP44Q9C0F1 390 aa19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 ATP13A1Q9HD20 1204 aa19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 HECAQ9UBI9 543 aaPredicted RBP19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 ZNF212Q9UDV6 495 aa19.27■□□□□ 0.68
SUPT16H-203ENST00000555752 RELNP78509 3460 aa19.27■□□□□ 0.67
SUPT16H-203ENST00000555752 PSMA7O14818 248 aa19.26■□□□□ 0.67
SUPT16H-203ENST00000555752 SRGAP2O75044 1071 aa19.26■□□□□ 0.67
SUPT16H-203ENST00000555752 JMJD7P0C870 316 aa19.26■□□□□ 0.67
SUPT16H-203ENST00000555752 ITIH2P19823 946 aa19.26■□□□□ 0.67
SUPT16H-203ENST00000555752 NOS2P35228 1153 aa19.26■□□□□ 0.67
SUPT16H-203ENST00000555752 ETV5P41161 510 aa19.26■□□□□ 0.67
SUPT16H-203ENST00000555752 RNASE9P60153 205 aaKnown RBP19.26■□□□□ 0.67
SUPT16H-203ENST00000555752 PPARDQ03181 441 aa19.26■□□□□ 0.67
SUPT16H-203ENST00000555752 MTA1Q13330 715 aa19.26■□□□□ 0.67
SUPT16H-203ENST00000555752 EIF3IQ13347 325 aaKnown RBP19.26■□□□□ 0.67
SUPT16H-203ENST00000555752 PTK2BQ14289 1009 aa19.26■□□□□ 0.67
SUPT16H-203ENST00000555752 RETSATQ6NUM9 610 aa19.26■□□□□ 0.67
SUPT16H-203ENST00000555752 TTI2Q6NXR4 508 aa19.26■□□□□ 0.67
SUPT16H-203ENST00000555752 TRIM59Q8IWR1 403 aa19.26■□□□□ 0.67
SUPT16H-203ENST00000555752 RYBPQ8N488 228 aaPredicted RBP19.26■□□□□ 0.67
SUPT16H-203ENST00000555752 SPATA20Q8TB22 786 aa19.26■□□□□ 0.67
SUPT16H-203ENST00000555752 ASB12Q8WXK4 309 aa19.26■□□□□ 0.67
SUPT16H-203ENST00000555752 TBATAQ96M53 351 aa19.26■□□□□ 0.67
SUPT16H-203ENST00000555752 STRADBQ9C0K7 418 aa19.26■□□□□ 0.67
SUPT16H-203ENST00000555752 FOXJ2Q9P0K8 574 aa19.26■□□□□ 0.67
SUPT16H-203ENST00000555752 ANKMY1Q9P2S6 941 aa19.26■□□□□ 0.67
SUPT16H-203ENST00000555752 LOXL2Q9Y4K0 774 aa19.26■□□□□ 0.67
SUPT16H-203ENST00000555752 IGLV3-10A0A075B6K4 115 aa19.25■□□□□ 0.67
SUPT16H-203ENST00000555752 MMP20O60882 483 aa19.25■□□□□ 0.67
SUPT16H-203ENST00000555752 AFPP02771 609 aaKnown RBP19.25■□□□□ 0.67
SUPT16H-203ENST00000555752 SULT1E1P49888 294 aa19.25■□□□□ 0.67
SUPT16H-203ENST00000555752 SLC6A3Q01959 620 aa19.25■□□□□ 0.67
SUPT16H-203ENST00000555752 ARHGAP44Q17R89 818 aa19.25■□□□□ 0.67
SUPT16H-203ENST00000555752 PTPN20Q4JDL3 420 aa19.25■□□□□ 0.67
SUPT16H-203ENST00000555752 BRMS1LQ5PSV4 323 aa19.25■□□□□ 0.67
SUPT16H-203ENST00000555752 MANEAQ5SRI9 462 aa19.25■□□□□ 0.67
SUPT16H-203ENST00000555752 KLHL10Q6JEL2 608 aa19.25■□□□□ 0.67
SUPT16H-203ENST00000555752 LRRC31Q6UY01 552 aa19.25■□□□□ 0.67
SUPT16H-203ENST00000555752 MACC1Q6ZN28 852 aa19.25■□□□□ 0.67
SUPT16H-203ENST00000555752 SLC26A9Q7LBE3 791 aa19.25■□□□□ 0.67
SUPT16H-203ENST00000555752 DRC7Q8IY82 874 aa19.25■□□□□ 0.67
SUPT16H-203ENST00000555752 SMARCE1Q969G3 411 aa19.25■□□□□ 0.67
SUPT16H-203ENST00000555752 TSACCQ96A04 125 aaPredicted RBP19.25■□□□□ 0.67
SUPT16H-203ENST00000555752 SEMA3CQ99985 751 aa19.25■□□□□ 0.67
SUPT16H-203ENST00000555752 PLCB1Q9NQ66 1216 aa19.25■□□□□ 0.67
SUPT16H-203ENST00000555752 DOLKQ9UPQ8 538 aa19.25■□□□□ 0.67
SUPT16H-203ENST00000555752 ILVBLA1L0T0 632 aa19.24■□□□□ 0.67
SUPT16H-203ENST00000555752 KRIT1O00522 736 aa19.24■□□□□ 0.67
SUPT16H-203ENST00000555752 NVLO15381 856 aaKnown RBP19.24■□□□□ 0.67
SUPT16H-203ENST00000555752 UGT2B4P06133 528 aa19.24■□□□□ 0.67
SUPT16H-203ENST00000555752 CCKBRP32239 447 aa19.24■□□□□ 0.67
SUPT16H-203ENST00000555752 ACVRL1P37023 503 aa19.24■□□□□ 0.67
SUPT16H-203ENST00000555752 GNA12Q03113 381 aa19.24■□□□□ 0.67
SUPT16H-203ENST00000555752 ZNF805Q5CZA5 627 aa19.24■□□□□ 0.67
SUPT16H-203ENST00000555752 KCTD16Q68DU8 428 aa19.24■□□□□ 0.67
SUPT16H-203ENST00000555752 LEKR1Q6ZMV7 388 aa19.24■□□□□ 0.67
SUPT16H-203ENST00000555752 ZSCAN30Q86W11 494 aa19.24■□□□□ 0.67
SUPT16H-203ENST00000555752 PTRH1Q86Y79 214 aaKnown RBP19.24■□□□□ 0.67
SUPT16H-203ENST00000555752 HID1Q8IV36 788 aa19.24■□□□□ 0.67
SUPT16H-203ENST00000555752 Q8N9G6 341 aaPredicted RBP19.24■□□□□ 0.67
SUPT16H-203ENST00000555752 RAB7BQ96AH8 199 aa19.24■□□□□ 0.67
SUPT16H-203ENST00000555752 CCDC34Q96HJ3 373 aa19.24■□□□□ 0.67
SUPT16H-203ENST00000555752 DHTKD1Q96HY7 919 aaPredicted RBP19.24■□□□□ 0.67
SUPT16H-203ENST00000555752 TBCBQ99426 244 aa19.24■□□□□ 0.67
SUPT16H-203ENST00000555752 CRACR2AQ9BSW2 395 aa19.24■□□□□ 0.67
SUPT16H-203ENST00000555752 FUCA2Q9BTY2 467 aa19.24■□□□□ 0.67
SUPT16H-203ENST00000555752 LRRN3Q9H3W5 708 aa19.24■□□□□ 0.67
SUPT16H-203ENST00000555752 FLNCQ14315 2725 aa19.24■□□□□ 0.67
SUPT16H-203ENST00000555752 LRP4O75096 1905 aa19.23■□□□□ 0.67
SUPT16H-203ENST00000555752 ZFC3H1O60293 1989 aaKnown RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms