RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 TRIP11Q15643 1979 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 SPTA1P02549 2419 aa5.03□□□□□ -1.6
ATXN3-229ENST00000554672 GOLGA4Q13439 2230 aaKnown RBP5.03□□□□□ -1.6
ATXN3-229ENST00000554672 A0A1W2PQJ5 194 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 A0A1W2PR77 199 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 FAM47DPA6NHR8 397 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 LRRC72A6NJI9 287 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 K7ENP7 123 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 MAGEC1O60732 1142 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 STC2O76061 302 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 WNT1P04628 370 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 RALAP11233 206 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 TNNI1P19237 187 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 LONP1P36776 959 aaKnown RBP5.02□□□□□ -1.61
ATXN3-229ENST00000554672 CCR5P51681 352 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 GALCP54803 685 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 INHBCP55103 352 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 MAP3K7CLP57077 242 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 NXPH1P58417 271 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 GABREP78334 506 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 ASIC1P78348 528 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 FNDC3BQ53EP0 1204 aaKnown RBP5.02□□□□□ -1.61
ATXN3-229ENST00000554672 C10orf120Q5SQS8 335 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 SFMBT2Q5VUG0 894 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 TMEM215Q68D42 235 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 ZNF776Q68DI1 518 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-229ENST00000554672 INO80CQ6PI98 192 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-229ENST00000554672 KDM7AQ6ZMT4 941 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 CPNE8Q86YQ8 564 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 CBWD2Q8IUF1 395 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 FUKQ8N0W3 1084 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 CRYBG2Q8N1P7 616 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 CPXM2Q8N436 756 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 ZMIZ2Q8NF64 920 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 GANCQ8TET4 914 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 DDI1Q8WTU0 396 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 SORCS1Q8WY21 1168 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 SYAP1Q96A49 352 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-229ENST00000554672 P2RY11Q96G91 374 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 VCPIP1Q96JH7 1222 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 ZSCAN31Q96LW9 406 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-229ENST00000554672 CDK5RAP1Q96SZ6 601 aaKnown RBP5.02□□□□□ -1.61
ATXN3-229ENST00000554672 SMOQ99835 787 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 POLR1BQ9H9Y6 1135 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 EBF2Q9HAK2 575 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 NMUR1Q9HB89 426 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 PRSS16Q9NQE7 514 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 OLFML3Q9NRN5 406 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 AASDHPPTQ9NRN7 309 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 THSD1Q9NS62 852 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.02□□□□□ -1.61
ATXN3-229ENST00000554672 OSER1Q9NX31 292 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 FBXL12Q9NXK8 326 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 CLIC5Q9NZA1 410 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 TBC1D7Q9P0N9 293 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 CGGBP1Q9UFW8 167 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-229ENST00000554672 CLEC4EQ9ULY5 219 aa5.02□□□□□ -1.61
ATXN3-229ENST00000554672 TNRC6BQ9UPQ9 1833 aaKnown RBP5.02□□□□□ -1.61
ATXN3-229ENST00000554672 PTPRDP23468 1912 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 PTPRQQ9UMZ3 2332 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 CITO14578 2027 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 MDM4O15151 490 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 OPA1O60313 960 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 EIF5BO60841 1220 aaKnown RBP5.01□□□□□ -1.61
ATXN3-229ENST00000554672 RNASEH1O60930 286 aaKnown RBP5.01□□□□□ -1.61
ATXN3-229ENST00000554672 USP12O75317 370 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 BEST1O76090 585 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 BMP15O95972 392 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 AFPP02771 609 aaKnown RBP5.01□□□□□ -1.61
ATXN3-229ENST00000554672 ATP5BP06576 529 aaKnown RBP5.01□□□□□ -1.61
ATXN3-229ENST00000554672 CELA3BP08861 270 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 DLDP09622 509 aaKnown RBP5.01□□□□□ -1.61
ATXN3-229ENST00000554672 DLATP10515 647 aaKnown RBP5.01□□□□□ -1.61
ATXN3-229ENST00000554672 SFTPCP11686 197 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 GP1BBP13224 206 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 TRIM21P19474 475 aaKnown RBP5.01□□□□□ -1.61
ATXN3-229ENST00000554672 RBMS1P29558 406 aaKnown RBP5.01□□□□□ -1.61
ATXN3-229ENST00000554672 CORO1AP31146 461 aaKnown RBP5.01□□□□□ -1.61
ATXN3-229ENST00000554672 KCNC1P48547 511 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 MYL6P60660 151 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 SLC7A5Q01650 507 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 OVGP1Q12889 678 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 NFATC3Q12968 1075 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 SERINC3Q13530 473 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 BMT2Q1RMZ1 405 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 ARL13BQ3SXY8 428 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 MPPE1Q53F39 396 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 HS1BP3Q53T59 392 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 KIAA1614Q5VZ46 1190 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 NCEH1Q6PIU2 408 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 LIPIQ6XZB0 460 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 STXBP4Q6ZWJ1 553 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 CHST9Q7L1S5 443 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 KANSL1Q7Z3B3 1105 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 ACOT1Q86TX2 421 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 ADIPOR2Q86V24 386 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 DENND1CQ8IV53 801 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 LZTR1Q8N653 840 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 FAM169BQ8N8A8 192 aa5.01□□□□□ -1.61
ATXN3-229ENST00000554672 EXD3Q8N9H8 876 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms