RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 GDAP1L1Q96MZ0 367 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 XPO6Q96QU8 1125 aaKnown RBP11.02□□□□□ -0.65
PABPN1-203ENST00000553960 LYSMD1Q96S90 227 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 BBS2Q9BXC9 721 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 MUC3BQ9H195 1237 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 TTYH1Q9H313 450 aaPredicted RBP11.02□□□□□ -0.65
PABPN1-203ENST00000553960 TRABDQ9H4I3 376 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 CERS4Q9HA82 394 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 NT5MQ9NPB1 228 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 TREX1Q9NSU2 369 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 DUS2Q9NX74 493 aaKnown RBP11.02□□□□□ -0.65
PABPN1-203ENST00000553960 NSMCE4AQ9NXX6 385 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 HACD3Q9P035 362 aa11.02□□□□□ -0.65
PABPN1-203ENST00000553960 ZCWPW2A0A1B0GU75 182 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 HEATR9A2RTY3 570 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.01□□□□□ -0.65
PABPN1-203ENST00000553960 ARNTLO00327 626 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 TSPAN3O60637 253 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 TBX10O75333 385 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 NEBLO76041 1014 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 PRLP01236 227 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 PSMC3P17980 439 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 GCAP28676 217 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 HADHAP40939 763 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 GRIA1P42261 906 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 LMAN1P49257 510 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 SERPINB9P50453 376 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 PTPN5P54829 565 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 RBM10P98175 930 aaKnown RBP11.01□□□□□ -0.65
PABPN1-203ENST00000553960 PDE1BQ01064 536 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 PITRM1Q5JRX3 1037 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 CEP85LQ5SZL2 805 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 ZNF697Q5TEC3 545 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 KIAA0930Q6ICG6 404 aaPredicted RBP11.01□□□□□ -0.65
PABPN1-203ENST00000553960 CHRDL2Q6WN34 429 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 TIFABQ6ZNK6 161 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 KIAA0408Q6ZU52 694 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 MARK2Q7KZI7 788 aaKnown RBP11.01□□□□□ -0.65
PABPN1-203ENST00000553960 SLC26A11Q86WA9 606 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 PHTF2Q8N3S3 785 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 CARNMT1Q8N4J0 409 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 SH2D3CQ8N5H7 860 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 C12orf76Q8N812 135 aaPredicted RBP11.01□□□□□ -0.65
PABPN1-203ENST00000553960 BRSK1Q8TDC3 778 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 KCNV2Q8TDN2 545 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 ISL2Q96A47 359 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 ECHDC3Q96DC8 303 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 MTBPQ96DY7 904 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 PWWP2AQ96N64 755 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 ZNF641Q96N77 438 aaPredicted RBP11.01□□□□□ -0.65
PABPN1-203ENST00000553960 SEMA3CQ99985 751 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 CINPQ9BW66 212 aaPredicted RBP11.01□□□□□ -0.65
PABPN1-203ENST00000553960 TDRD1Q9BXT4 1180 aaKnown RBP11.01□□□□□ -0.65
PABPN1-203ENST00000553960 LINC00597Q9H2U6 94 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 GGA2Q9UJY4 613 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 STARD13Q9Y3M8 1113 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 TTLL3Q9Y4R7 772 aa11.01□□□□□ -0.65
PABPN1-203ENST00000553960 ANKRD36A6QL64 1941 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 TSPAN11A1L157 253 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 SPDYE4A6NLX3 237 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 HEPACAM2A8MVW5 462 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 GOLGA8MH3BSY2 632 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 H7C0S8 307 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 CBX4O00257 560 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 TRAFD1O14545 582 aaPredicted RBP11□□□□□ -0.65
PABPN1-203ENST00000553960 SLC7A4O43246 635 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 AVILO75366 819 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 ACSL3O95573 720 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 MT-CYBP00156 380 aaPredicted RBP11□□□□□ -0.65
PABPN1-203ENST00000553960 CPP00450 1065 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 SHBGP04278 402 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 DLDP09622 509 aaKnown RBP11□□□□□ -0.65
PABPN1-203ENST00000553960 ADH5P11766 374 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 ECT2LQ008S8 904 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 IFFO1Q0D2I5 559 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 ENPP2Q13822 863 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 CRYMQ14894 314 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 ANKRD20A4Q4UJ75 823 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 FAXCQ5TGI0 409 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 APCDD1Q8J025 514 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 CCDC33Q8N5R6 958 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 ARFGAP2Q8N6H7 521 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 OR2AP1Q8NGE2 309 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 OR52K1Q8NGK4 314 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 SPATA22Q8NHS9 363 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 GABPB2Q8TAK5 448 aaPredicted RBP11□□□□□ -0.65
PABPN1-203ENST00000553960 ALKBH8Q96BT7 664 aaKnown RBP11□□□□□ -0.65
PABPN1-203ENST00000553960 SPON2Q9BUD6 331 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 FSD1LQ9BXM9 530 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 ADGRE3Q9BY15 652 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 ECT2Q9H8V3 914 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 MAGEE1Q9HCI5 957 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 MKS1Q9NXB0 559 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 SAMD15Q9P1V8 674 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11□□□□□ -0.65
PABPN1-203ENST00000553960 PSMC3IPQ9P2W1 217 aaPredicted RBP11□□□□□ -0.65
PABPN1-203ENST00000553960 TCAF1Q9Y4C2 921 aa11□□□□□ -0.65
PABPN1-203ENST00000553960 MUC22E2RYF6 1773 aaPredicted RBP10.99□□□□□ -0.65
PABPN1-203ENST00000553960 EXOC1LA0A1B0GW35 172 aa10.99□□□□□ -0.65
PABPN1-203ENST00000553960 H3BQF6 201 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms