RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 RFTN1Q14699 578 aaPredicted RBP20.64■□□□□ 0.89
FOXA1-203ENST00000553751 SETMARQ53H47 684 aaPredicted RBP20.64■□□□□ 0.89
FOXA1-203ENST00000553751 ANKRD20A8PQ5CZ79 823 aa20.64■□□□□ 0.89
FOXA1-203ENST00000553751 PPM1JQ5JR12 505 aa20.64■□□□□ 0.89
FOXA1-203ENST00000553751 NCBP2-AS2Q69YL0 99 aa20.64■□□□□ 0.89
FOXA1-203ENST00000553751 IL27RAQ6UWB1 636 aa20.64■□□□□ 0.89
FOXA1-203ENST00000553751 PRPF39Q86UA1 669 aaKnown RBP20.64■□□□□ 0.89
FOXA1-203ENST00000553751 HORMAD1Q86X24 394 aa20.64■□□□□ 0.89
FOXA1-203ENST00000553751 TSEN2Q8NCE0 465 aaKnown RBP20.64■□□□□ 0.89
FOXA1-203ENST00000553751 KLHL32Q96NJ5 620 aa20.64■□□□□ 0.89
FOXA1-203ENST00000553751 CPEB1Q9BZB8 566 aaKnown RBP20.64■□□□□ 0.89
FOXA1-203ENST00000553751 IL21RQ9HBE5 538 aa20.64■□□□□ 0.89
FOXA1-203ENST00000553751 AASDHPPTQ9NRN7 309 aa20.64■□□□□ 0.89
FOXA1-203ENST00000553751 ZFR2Q9UPR6 939 aaKnown RBP20.64■□□□□ 0.89
FOXA1-203ENST00000553751 DMTF1Q9Y222 760 aa20.64■□□□□ 0.89
FOXA1-203ENST00000553751 PCDHA13Q9Y5I0 950 aa20.64■□□□□ 0.89
FOXA1-203ENST00000553751 SNX11Q9Y5W9 270 aa20.64■□□□□ 0.89
FOXA1-203ENST00000553751 MUSKO15146 869 aa20.63■□□□□ 0.89
FOXA1-203ENST00000553751 AP1G1O43747 822 aa20.63■□□□□ 0.89
FOXA1-203ENST00000553751 MFSD11O43934 449 aa20.63■□□□□ 0.89
FOXA1-203ENST00000553751 MAFKO60675 156 aa20.63■□□□□ 0.89
FOXA1-203ENST00000553751 PIGNO95427 931 aa20.63■□□□□ 0.89
FOXA1-203ENST00000553751 CER1O95813 267 aa20.63■□□□□ 0.89
FOXA1-203ENST00000553751 PEX11BO96011 259 aa20.63■□□□□ 0.89
FOXA1-203ENST00000553751 HADHBP55084 474 aaKnown RBP20.63■□□□□ 0.89
FOXA1-203ENST00000553751 ZNF284Q2VY69 593 aa20.63■□□□□ 0.89
FOXA1-203ENST00000553751 HLA-BQ31612 363 aa20.63■□□□□ 0.89
FOXA1-203ENST00000553751 TMEM259Q4ZIN3 620 aa20.63■□□□□ 0.89
FOXA1-203ENST00000553751 TMCO4Q5TGY1 634 aa20.63■□□□□ 0.89
FOXA1-203ENST00000553751 SEL1L3Q68CR1 1132 aa20.63■□□□□ 0.89
FOXA1-203ENST00000553751 ADAT2Q7Z6V5 191 aaKnown RBP20.63■□□□□ 0.89
FOXA1-203ENST00000553751 TMTC1Q8IUR5 882 aa20.63■□□□□ 0.89
FOXA1-203ENST00000553751 ATPAF2Q8N5M1 289 aa20.63■□□□□ 0.89
FOXA1-203ENST00000553751 RAPGEF5Q92565 580 aa20.63■□□□□ 0.89
FOXA1-203ENST00000553751 RAB7BQ96AH8 199 aa20.63■□□□□ 0.89
FOXA1-203ENST00000553751 ZNF599Q96NL3 588 aa20.63■□□□□ 0.89
FOXA1-203ENST00000553751 CINPQ9BW66 212 aaPredicted RBP20.63■□□□□ 0.89
FOXA1-203ENST00000553751 GAREM1Q9H706 876 aa20.63■□□□□ 0.89
FOXA1-203ENST00000553751 TFR2Q9UP52 801 aa20.63■□□□□ 0.89
FOXA1-203ENST00000553751 FNDC3AQ9Y2H6 1198 aaKnown RBP20.63■□□□□ 0.89
FOXA1-203ENST00000553751 DOCK9Q9BZ29 2069 aa20.62■□□□□ 0.89
FOXA1-203ENST00000553751 UPK3BL1B0FP48 263 aa20.62■□□□□ 0.89
FOXA1-203ENST00000553751 UPK3BL2E5RIL1 263 aa20.62■□□□□ 0.89
FOXA1-203ENST00000553751 PCDH8O95206 1070 aa20.62■□□□□ 0.89
FOXA1-203ENST00000553751 NDUFA10O95299 355 aa20.62■□□□□ 0.89
FOXA1-203ENST00000553751 PRLRP16471 622 aa20.62■□□□□ 0.89
FOXA1-203ENST00000553751 CD38P28907 300 aa20.62■□□□□ 0.89
FOXA1-203ENST00000553751 SLC1A1P43005 524 aa20.62■□□□□ 0.89
FOXA1-203ENST00000553751 CTSKP43235 329 aa20.62■□□□□ 0.89
FOXA1-203ENST00000553751 CSNK1DP48730 415 aa20.62■□□□□ 0.89
FOXA1-203ENST00000553751 SLC10A7Q0GE19 358 aa20.62■□□□□ 0.89
FOXA1-203ENST00000553751 LBRQ14739 615 aaKnown RBP20.62■□□□□ 0.89
FOXA1-203ENST00000553751 PAFAH1B3Q15102 231 aaKnown RBP20.62■□□□□ 0.89
FOXA1-203ENST00000553751 SPA17Q15506 151 aa20.62■□□□□ 0.89
FOXA1-203ENST00000553751 MAP7D3Q8IWC1 876 aa20.62■□□□□ 0.89
FOXA1-203ENST00000553751 PQLC3Q8N755 202 aa20.62■□□□□ 0.89
FOXA1-203ENST00000553751 PSKH2Q96QS6 385 aa20.62■□□□□ 0.89
FOXA1-203ENST00000553751 DKK3Q9UBP4 350 aa20.62■□□□□ 0.89
FOXA1-203ENST00000553751 GGT7Q9UJ14 662 aa20.62■□□□□ 0.89
FOXA1-203ENST00000553751 ITM2BQ9Y287 266 aa20.62■□□□□ 0.89
FOXA1-203ENST00000553751 TP53BP1Q12888 1972 aaPredicted RBP20.62■□□□□ 0.89
FOXA1-203ENST00000553751 TMEM131Q92545 1883 aa20.61■□□□□ 0.89
FOXA1-203ENST00000553751 MED19A0JLT2 244 aaPredicted RBP20.61■□□□□ 0.89
FOXA1-203ENST00000553751 TSPAN11A1L157 253 aa20.61■□□□□ 0.89
FOXA1-203ENST00000553751 BUB1BO60566 1050 aaPredicted RBP20.61■□□□□ 0.89
FOXA1-203ENST00000553751 KCNK5O95279 499 aa20.61■□□□□ 0.89
FOXA1-203ENST00000553751 CD59P13987 128 aa20.61■□□□□ 0.89
FOXA1-203ENST00000553751 CSRP1P21291 193 aaKnown RBP20.61■□□□□ 0.89
FOXA1-203ENST00000553751 KDELR1P24390 212 aa20.61■□□□□ 0.89
FOXA1-203ENST00000553751 C21orf59P57076 290 aa20.61■□□□□ 0.89
FOXA1-203ENST00000553751 SLC14A1Q13336 389 aa20.61■□□□□ 0.89
FOXA1-203ENST00000553751 GRM3Q14832 879 aa20.61■□□□□ 0.89
FOXA1-203ENST00000553751 LRRC38Q5VT99 294 aa20.61■□□□□ 0.89
FOXA1-203ENST00000553751 KIAA1161Q6NSJ0 714 aa20.61■□□□□ 0.89
FOXA1-203ENST00000553751 RAD9BQ6WBX8 426 aa20.61■□□□□ 0.89
FOXA1-203ENST00000553751 PIP4P1Q86T03 277 aa20.61■□□□□ 0.89
FOXA1-203ENST00000553751 SRLQ86TD4 932 aa20.61■□□□□ 0.89
FOXA1-203ENST00000553751 TMEM145Q8NBT3 493 aa20.61■□□□□ 0.89
FOXA1-203ENST00000553751 KLK6Q92876 244 aa20.61■□□□□ 0.89
FOXA1-203ENST00000553751 TUBGCP5Q96RT8 1024 aa20.61■□□□□ 0.89
FOXA1-203ENST00000553751 SEPT3Q9UH03 358 aa20.61■□□□□ 0.89
FOXA1-203ENST00000553751 CA5BQ9Y2D0 317 aa20.61■□□□□ 0.89
FOXA1-203ENST00000553751 HYOU1Q9Y4L1 999 aa20.61■□□□□ 0.89
FOXA1-203ENST00000553751 EPN1Q9Y6I3 576 aaPredicted RBP20.61■□□□□ 0.89
FOXA1-203ENST00000553751 A0A0A6YYK5 440 aaPredicted RBP20.6■□□□□ 0.89
FOXA1-203ENST00000553751 LRRD1A4D1F6 860 aa20.6■□□□□ 0.89
FOXA1-203ENST00000553751 C3orf70A6NLC5 250 aaPredicted RBP20.6■□□□□ 0.89
FOXA1-203ENST00000553751 PRAMEF26H0Y7S4 382 aa20.6■□□□□ 0.89
FOXA1-203ENST00000553751 AREL1O15033 823 aa20.6■□□□□ 0.89
FOXA1-203ENST00000553751 TSPAN6O43657 245 aa20.6■□□□□ 0.89
FOXA1-203ENST00000553751 ZNF883P0CG24 379 aa20.6■□□□□ 0.89
FOXA1-203ENST00000553751 COMTP21964 271 aa20.6■□□□□ 0.89
FOXA1-203ENST00000553751 RPS21P63220 83 aaKnown RBP20.6■□□□□ 0.89
FOXA1-203ENST00000553751 NSUN2Q08J23 767 aaKnown RBP eCLIP20.6■□□□□ 0.89
FOXA1-203ENST00000553751 GALNT2Q10471 571 aa20.6■□□□□ 0.89
FOXA1-203ENST00000553751 ZNF423Q2M1K9 1284 aa20.6■□□□□ 0.89
FOXA1-203ENST00000553751 LRRC73Q5JTD7 316 aa20.6■□□□□ 0.89
FOXA1-203ENST00000553751 ZFYVE27Q5T4F4 411 aa20.6■□□□□ 0.89
FOXA1-203ENST00000553751 TMEM139Q8IV31 216 aa20.6■□□□□ 0.89
FOXA1-203ENST00000553751 ANP32EQ9BTT0 268 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms