RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 IKBKEQ14164 716 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 INSCQ1MX18 579 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 HABP4Q5JVS0 413 aaKnown RBP10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 SPANXN3Q5MJ09 141 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 C16orf87Q6PH81 154 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 POTEHQ6S545 545 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 OTOP3Q7RTS5 596 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 RNF168Q8IYW5 571 aaPredicted RBP10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 NAT16Q8N8M0 369 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 CNDP1Q96KN2 507 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 FAM167AQ96KS9 214 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 RBM38Q9H0Z9 239 aaKnown RBP10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 ZBTB26Q9HCK0 441 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 FBRSL1Q9HCM7 1045 aaKnown RBP10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 GIMAP2Q9UG22 337 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 TNFSF13BQ9Y275 285 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 ASB14A6NK59 587 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 C9IYK1 514 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 DFFAO00273 331 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 BCAS2O75934 225 aaPredicted RBP10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 DDHD2O94830 711 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 MAGEA6P43360 314 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 TM4SF4P48230 202 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 GJA9P57773 515 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 TPI1P60174 286 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 MAP2K5Q13163 448 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 TTLL4Q14679 1199 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 PLCL1Q15111 1095 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 PCSK7Q16549 785 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 FBXO48Q5FWF7 155 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 SYPL2Q5VXT5 272 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 METTL21CQ5VZV1 264 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 C4orf22Q6V702 233 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 GTF3C2Q8WUA4 911 aaPredicted RBP10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 SLC35F5Q8WV83 523 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 CANT1Q8WVQ1 401 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 NAT9Q9BTE0 207 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 FZD8Q9H461 694 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 PDZD7Q9H5P4 517 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 ARMC7Q9H6L4 198 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 ZNF696Q9H7X3 374 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 LRRC4Q9HBW1 653 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 TIMMDC1Q9NPL8 285 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 HEATR9A2RTY3 570 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 PRORSD1PA6NEY8 169 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 TRIM38O00635 465 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 TIMM44O43615 452 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 DLX3O60479 287 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 MT-CYBP00156 380 aaPredicted RBP10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 ERCC2P18074 760 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 NR4A1P22736 598 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 YWHAQP27348 245 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 HSPA13P48723 471 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 MARCH8Q5T0T0 291 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 STEAP4Q687X5 459 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 ZNF554Q86TJ5 538 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 CBR4Q8N4T8 237 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 CXorf38Q8TB03 319 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 EDEM1Q92611 657 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 PLEKHG4BQ96PX9 1271 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 UPF3AQ9H1J1 476 aaKnown RBP10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 SNX25Q9H3E2 840 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 PRMT7Q9NVM4 692 aaPredicted RBP10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 CACNG4Q9UBN1 327 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 ACOT9Q9Y305 439 aa10.86□□□□□ -0.67
SMARCC2-208ENST00000550150 TCAF2A6NFQ2 919 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 MRASO14807 208 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 PMPCBO75439 489 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 MPOP05164 745 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 CAPRIN1Q14444 709 aaKnown RBP10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 ANO4Q32M45 955 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 SMYD5Q6GMV2 418 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 ZNF467Q7Z7K2 595 aaPredicted RBP10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 PATL1Q86TB9 770 aaKnown RBP10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 PSTKQ8IV42 348 aaKnown RBP10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 SIX6OS1Q8N1H7 587 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 DRC3Q9H069 523 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 NME7Q9Y5B8 376 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 TMEM114B3SHH9 223 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 J3QRK9 145 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 PSMD12O00232 456 aaPredicted RBP10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 NR5A2O00482 541 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 CCL22O00626 93 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 SOCS2O14508 198 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 UBDO15205 165 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 CCDC166P0CW27 439 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 MLNP12872 115 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 ALOX15P16050 662 aaPredicted RBP10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 ZNF26P17031 533 aaPredicted RBP10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 PTPN3P26045 913 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 PRDX6P30041 224 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 LRPAP1P30533 357 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 ATICP31939 592 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 VASPP50552 380 aaPredicted RBP10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 CDH13P55290 713 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 BEX3Q00994 111 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 CBX3Q13185 183 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 TRIM25Q14258 630 aaKnown RBP10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 FUT11Q495W5 492 aa10.85□□□□□ -0.67
SMARCC2-208ENST00000550150 TBCELQ5QJ74 424 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms