RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 KIAA1161Q6NSJ0 714 aa17.47■□□□□ 0.39
CHMP1A-208ENST00000550102 GDPD4Q6W3E5 623 aa17.47■□□□□ 0.39
CHMP1A-208ENST00000550102 ZSCAN30Q86W11 494 aa17.47■□□□□ 0.39
CHMP1A-208ENST00000550102 NAXDQ8IW45 347 aa17.47■□□□□ 0.39
CHMP1A-208ENST00000550102 RHOT2Q8IXI1 618 aa17.47■□□□□ 0.39
CHMP1A-208ENST00000550102 TC2NQ8N9U0 490 aa17.47■□□□□ 0.39
CHMP1A-208ENST00000550102 NETO2Q8NC67 525 aa17.47■□□□□ 0.39
CHMP1A-208ENST00000550102 RFFLQ8WZ73 363 aa17.47■□□□□ 0.39
CHMP1A-208ENST00000550102 MRFAP1L1Q96HT8 127 aa17.47■□□□□ 0.39
CHMP1A-208ENST00000550102 CINPQ9BW66 212 aaPredicted RBP17.47■□□□□ 0.39
CHMP1A-208ENST00000550102 TM7SF3Q9NS93 570 aa17.47■□□□□ 0.39
CHMP1A-208ENST00000550102 IPO11Q9UI26 975 aaKnown RBP17.47■□□□□ 0.39
CHMP1A-208ENST00000550102 FADS3Q9Y5Q0 445 aa17.47■□□□□ 0.39
CHMP1A-208ENST00000550102 A0A1W2PR77 199 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 C16orf96A6NNT2 1141 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 TMEM110-MUSTN1A8MSY1 372 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 WNT9AO14904 365 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 DFNA5O60443 496 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 PALMO75781 387 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 WNT1P04628 370 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 KRT7P08729 469 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 PRLRP16471 622 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 AKT2P31751 481 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 ABL2P42684 1182 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 RPS21P63220 83 aaKnown RBP17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 OVGP1Q12889 678 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 GRM3Q14832 879 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 ZNF423Q2M1K9 1284 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 TMEM259Q4ZIN3 620 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 TMCO4Q5TGY1 634 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 IQCHQ86VS3 1027 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 CPNE8Q86YQ8 564 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 ATPAF2Q8N5M1 289 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 MFSD2AQ8NA29 543 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 SLC35G2Q8TBE7 412 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 FAM71BQ8TC56 605 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 KLHL32Q96NJ5 620 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 ANP32EQ9BTT0 268 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 CALN1Q9BXU9 219 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 CPEB1Q9BZB8 566 aaKnown RBP17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 GDF3Q9NR23 364 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 ETNK2Q9NVF9 386 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 INTUQ9ULD6 942 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 PCDHGB2Q9Y5G2 931 aa17.46■□□□□ 0.39
CHMP1A-208ENST00000550102 H0Y8X5 98 aa17.45■□□□□ 0.38
CHMP1A-208ENST00000550102 NEMP1O14524 444 aa17.45■□□□□ 0.38
CHMP1A-208ENST00000550102 SLC31A1O15431 190 aa17.45■□□□□ 0.38
CHMP1A-208ENST00000550102 FLRT2O43155 660 aa17.45■□□□□ 0.38
CHMP1A-208ENST00000550102 TSPAN6O43657 245 aa17.45■□□□□ 0.38
CHMP1A-208ENST00000550102 MAGEC1O60732 1142 aa17.45■□□□□ 0.38
CHMP1A-208ENST00000550102 MTA2O94776 668 aa17.45■□□□□ 0.38
CHMP1A-208ENST00000550102 HNRNPA2B1P22626 353 aaKnown RBP17.45■□□□□ 0.38
CHMP1A-208ENST00000550102 HNRNPDQ14103 355 aaKnown RBP17.45■□□□□ 0.38
CHMP1A-208ENST00000550102 DPYSL3Q14195 570 aa17.45■□□□□ 0.38
CHMP1A-208ENST00000550102 MESDQ14696 234 aa17.45■□□□□ 0.38
CHMP1A-208ENST00000550102 STAT4Q14765 748 aa17.45■□□□□ 0.38
CHMP1A-208ENST00000550102 N4BP2L1Q5TBK1 243 aaPredicted RBP17.45■□□□□ 0.38
CHMP1A-208ENST00000550102 SEL1L3Q68CR1 1132 aa17.45■□□□□ 0.38
CHMP1A-208ENST00000550102 ARHGAP36Q6ZRI8 547 aa17.45■□□□□ 0.38
CHMP1A-208ENST00000550102 KLK6Q92876 244 aa17.45■□□□□ 0.38
CHMP1A-208ENST00000550102 VOPP1Q96AW1 172 aa17.45■□□□□ 0.38
CHMP1A-208ENST00000550102 ZNF599Q96NL3 588 aa17.45■□□□□ 0.38
CHMP1A-208ENST00000550102 TUBGCP5Q96RT8 1024 aa17.45■□□□□ 0.38
CHMP1A-208ENST00000550102 ZNF670Q9BS34 389 aa17.45■□□□□ 0.38
CHMP1A-208ENST00000550102 KLHL11Q9NVR0 708 aa17.45■□□□□ 0.38
CHMP1A-208ENST00000550102 DKK3Q9UBP4 350 aa17.45■□□□□ 0.38
CHMP1A-208ENST00000550102 SEPT3Q9UH03 358 aa17.45■□□□□ 0.38
CHMP1A-208ENST00000550102 ZFR2Q9UPR6 939 aaKnown RBP17.45■□□□□ 0.38
CHMP1A-208ENST00000550102 COL5A1P20908 1838 aaPredicted RBP17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 TLR4O00206 839 aa17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 INSIG1O15503 277 aa17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 SH3BP5O60239 455 aa17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 PIGNO95427 931 aa17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 CD48P09326 243 aa17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 ARHGAP25P42331 645 aa17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 ARSEP51690 589 aa17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 NXPH1P58417 271 aa17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 TAS2R40P59535 323 aa17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 MMRN1Q13201 1228 aa17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 ZNF235Q14590 738 aa17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 PDK2Q15119 407 aa17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 INAVAQ3KP66 663 aa17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 ZFYVE27Q5T4F4 411 aa17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 CFAP58Q5T655 872 aa17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 MAP7D3Q8IWC1 876 aa17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 TP53INP2Q8IXH6 220 aa17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 OXR1Q8N573 874 aa17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 TMEM145Q8NBT3 493 aa17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 KCTD6Q8NC69 237 aa17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 TSEN2Q8NCE0 465 aaKnown RBP17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 FEM1CQ96JP0 617 aa17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 MYOCQ99972 504 aa17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 ATP13A3Q9H7F0 1226 aa17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 ITM2BQ9Y287 266 aa17.44■□□□□ 0.38
CHMP1A-208ENST00000550102 ACACBO00763 2458 aa17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 TSPAN11A1L157 253 aa17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 AREL1O15033 823 aa17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 YKT6O15498 198 aa17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 SPINT1O43278 529 aa17.43■□□□□ 0.38
CHMP1A-208ENST00000550102 MFSD11O43934 449 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms